RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SMG5Q9UPR3 1016 aaKnown RBP8.14□□□□□ -1.11
PCDH9-205ENST00000614931 DOCK9Q9BZ29 2069 aa8.14□□□□□ -1.11
PCDH9-205ENST00000614931 CFAP54Q96N23 3096 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CCDC163A0A0D9SF12 145 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CXorf51AA0A1B0GTR3 108 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 GOLGA8MH3BSY2 632 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 K7EQS6 105 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ATP9BO43861 1147 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 RNF40O75150 1001 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 USP12O75317 370 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF189O75820 626 aaPredicted RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 KAT7O95251 611 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 PIGNO95427 931 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 AP2A1O95782 977 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ASLP04424 464 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 APODP05090 189 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 DLDP09622 509 aaKnown RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 HLA-EP13747 358 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ITIH2P19823 946 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 PRKCHP24723 683 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 GKP32189 559 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ADRA1AP35348 466 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ACTN2P35609 894 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CHRNA4P43681 627 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 RHOAP61586 193 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 TUBB4BP68371 445 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 SULT2A1Q06520 285 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ITKQ08881 620 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 TRAF2Q12933 501 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 MTM1Q13496 603 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CUL1Q13616 776 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 HLTFQ14527 1009 aaKnown RBP eCLIP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ZNF234Q14588 700 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 MORF4L2Q15014 288 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 DLG2Q15700 870 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 FNBP1LQ5T0N5 605 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 RETSATQ6NUM9 610 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 NCEH1Q6PIU2 408 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 C4orf22Q6V702 233 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 Q6ZVU0 165 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CAND1Q86VP6 1230 aaKnown RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 WDR5BQ86VZ2 330 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 IFT20Q8IY31 132 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 KIAA2013Q8IYS2 634 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ATP11CQ8NB49 1132 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 CCHCR1Q8TD31 782 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 NSMCE1Q8WV22 266 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 MRGPRX2Q96LB1 330 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 NUDCD1Q96RS6 583 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 APOL2Q9BQE5 337 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 FERMT1Q9BQL6 677 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 FICDQ9BVA6 458 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 NOD2Q9HC29 1040 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 EIF2B3Q9NR50 452 aaKnown RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 PIH1D1Q9NWS0 290 aaKnown RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 THAP10Q9P2Z0 257 aaPredicted RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 NCDNQ9UBB6 729 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 EVLQ9UI08 416 aaPredicted RBP8.13□□□□□ -1.11
PCDH9-205ENST00000614931 SLC25A13Q9UJS0 675 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 ANAPC5Q9UJX4 755 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 SHOC2Q9UQ13 582 aa8.13□□□□□ -1.11
PCDH9-205ENST00000614931 PLXNB3Q9ULL4 1909 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 WASH3PC4AMC7 463 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PMPCBO75439 489 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 NEBLO76041 1014 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SUN1O94901 812 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 GSRP00390 522 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PRLP01236 227 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 APRTP07741 180 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SRPRAP08240 638 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 TGM1P22735 817 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 GRIA2P42262 883 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 IL12RB1P42701 662 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 MAGEA3P43357 314 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 KIR2DL1P43626 348 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 VASPP50552 380 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SCNN1BP51168 640 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 GEMP55040 296 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SEC13P55735 322 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 WNT3AP56704 352 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 GEMIN4P57678 1058 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SLC20A2Q08357 652 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 CALCOCO2Q13137 446 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SRSF5Q13243 272 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SIM2Q14190 667 aaPredicted RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 FASTKD3Q14CZ7 662 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 EIF4HQ15056 248 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 PCSK7Q16549 785 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 FNDC3BQ53EP0 1204 aaKnown RBP8.12□□□□□ -1.11
PCDH9-205ENST00000614931 LAIR1Q6GTX8 287 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 DENND5AQ6IQ26 1287 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 FBXO38Q6PIJ6 1188 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SYT13Q7L8C5 426 aa8.12□□□□□ -1.11
PCDH9-205ENST00000614931 SRLQ86TD4 932 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms