RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 AURKAO14965 403 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 NRP2O60462 931 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 DNAJB2P25686 324 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 PIK3CGP48736 1102 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 SLC7A2P52569 658 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 SMIM11AP58511 58 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 DNASE1L3Q13609 305 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 MAPKAPK3Q16644 382 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 TXNDC11Q6PKC3 985 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 TMEM126BQ8IUX1 230 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CBR4Q8N4T8 237 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 UBA3Q8TBC4 463 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 C12orf43Q96C57 262 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 ACOX2Q99424 681 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 COQ10BQ9H8M1 238 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 RDH8Q9NYR8 311 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 N4BP2Q86UW6 1770 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 CD4P01730 458 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ZNF621Q6ZSS3 439 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 SAMD4AQ9UPU9 718 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 HNRNPH3P31942 346 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 HALP42357 657 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 POU6F1Q14863 301 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 MYBPC3Q14896 1274 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 IL27RAQ6UWB1 636 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 PIWIL4Q7Z3Z4 852 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 PRELID2Q8N945 189 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ERLEC1Q96DZ1 483 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 RANBP3Q9H6Z4 567 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 PRDM8Q9NQV8 689 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 KIAA1257Q9ULG3 409 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ZFC3H1O60293 1989 aaKnown RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 WWP2O00308 870 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 IFRD1O00458 451 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 SEC22BO75396 215 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 EPHA3P29320 983 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 MSX2P35548 267 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 LSAMPQ13449 338 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 PTAR1Q7Z6K3 402 aaPredicted RBP13.86□□□□□ -0.19
CHD1-212ENST00000614616 TMEM139Q8IV31 216 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 RACGAP1Q9H0H5 632 aa13.86□□□□□ -0.19
CHD1-212ENST00000614616 RBL1P28749 1068 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 S100A3P33764 101 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 GIT2Q14161 759 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 DOK7Q18PE1 504 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 DUSP9Q99956 384 aaKnown RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 SLC39A3Q9BRY0 314 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 ST3GAL5Q9UNP4 418 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 POMPQ9Y244 141 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 REM1O75628 298 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 NR2F6P10588 404 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 GPC1P35052 558 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 INO80EQ8NBZ0 244 aaPredicted RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 LTN1O94822 1766 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 KCNK1O00180 336 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 PLD2O14939 933 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 AP2A2O94973 939 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 MAP3K6O95382 1288 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 APOC1P02654 83 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 CYP1A1P04798 512 aaPredicted RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 MZF1P28698 734 aaPredicted RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 METTL21CQ5VZV1 264 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 TNFAIP8L1Q8WVP5 186 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 HTR3CQ8WXA8 447 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 CLPBQ9H078 707 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 NUP205Q92621 2012 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 MID1O15344 667 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 INPP4AQ96PE3 977 aaPredicted RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 CFL2Q9Y281 166 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 RCCD1A6NED2 376 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 STOMP27105 288 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 GRSF1Q12849 480 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD1-212ENST00000614616 PTBP2Q9UKA9 531 aaKnown RBP13.85□□□□□ -0.19
CHD1-212ENST00000614616 PSME2Q9UL46 239 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 HTR3EA5X5Y0 456 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 NFICP08651 508 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 KLRC3Q07444 240 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 GNA13Q14344 377 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 FAM92BQ6ZTR7 304 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 VN1R5Q7Z5H4 357 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 AP5M1Q9H0R1 490 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 PRDM16Q9HAZ2 1276 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 ADGRE2Q9UHX3 823 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 PACSIN3Q9UKS6 424 aa13.85□□□□□ -0.19
CHD1-212ENST00000614616 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms