RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 PALM2Q8IXS6 379 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 OR2AP1Q8NGE2 309 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 OR6K2Q8NGY2 324 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 FRS2Q8WU20 508 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 CFAP36Q96G28 342 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 IL22Q9GZX6 179 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 VPS37BQ9H9H4 285 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 RAI2Q9Y5P3 530 aa20.46■□□□□ 0.87
CPNE9-205ENST00000613455 PRLP01236 227 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 ATP5BP06576 529 aaKnown RBP20.45■□□□□ 0.86
CPNE9-205ENST00000613455 SOX9P48436 509 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 FAM193AP78312 1265 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 ZNF844Q08AG5 666 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 TRAF2Q12933 501 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 MSLNQ13421 630 aaPredicted RBP20.45■□□□□ 0.86
CPNE9-205ENST00000613455 EIF4HQ15056 248 aaKnown RBP20.45■□□□□ 0.86
CPNE9-205ENST00000613455 LEXMQ3ZCV2 418 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 CASC4Q6P4E1 433 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 UNC5AQ6ZN44 842 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 C3orf62Q6ZUJ4 267 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 PCDH20Q8N6Y1 951 aaKnown RBP20.45■□□□□ 0.86
CPNE9-205ENST00000613455 KCNK12Q9HB15 430 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 LIMD1Q9UGP4 676 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 EVLQ9UI08 416 aaPredicted RBP20.45■□□□□ 0.86
CPNE9-205ENST00000613455 CHKBQ9Y259 395 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 PCDHGC4Q9Y5F7 938 aa20.45■□□□□ 0.86
CPNE9-205ENST00000613455 GSRP00390 522 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 SRPRAP08240 638 aaKnown RBP20.44■□□□□ 0.86
CPNE9-205ENST00000613455 HLA-DPA1P20036 260 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 GALNT3Q14435 633 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 ACCSLQ4AC99 568 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 STEAP4Q687X5 459 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 Q6ZVU0 165 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 IFT43Q96FT9 208 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 A0A087WUV0 522 aaPredicted RBP20.44■□□□□ 0.86
CPNE9-205ENST00000613455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.44■□□□□ 0.86
CPNE9-205ENST00000613455 NDST3O95803 873 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 PGAM1P18669 254 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 GKP32189 559 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 SNRPD1P62314 119 aaKnown RBP20.44■□□□□ 0.86
CPNE9-205ENST00000613455 PLCD3Q8N3E9 789 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 NAT9Q9BTE0 207 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 SAMD15Q9P1V8 674 aa20.44■□□□□ 0.86
CPNE9-205ENST00000613455 ARIH1Q9Y4X5 557 aaPredicted RBP20.44■□□□□ 0.86
CPNE9-205ENST00000613455 TCRBV9S1A1TA0A576 114 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 TTC34A8MYJ7 566 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 SPAG6O75602 509 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 FGF1P05230 155 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 PDHA1P08559 390 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 BMP1P13497 986 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 MAPK8P45983 427 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 EIF3BP55884 814 aaKnown RBP20.43■□□□□ 0.86
CPNE9-205ENST00000613455 POU6F1Q14863 301 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 DPY19L3Q6ZPD9 716 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 CAMK1DQ8IU85 385 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 CCNJLQ8IV13 435 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 ACBD3Q9H3P7 528 aa20.43■□□□□ 0.86
CPNE9-205ENST00000613455 FZD6O60353 706 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 KAT7O95251 611 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 PIGNO95427 931 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 PHBP35232 272 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 CCNHP51946 323 aaPredicted RBP20.42■□□□□ 0.86
CPNE9-205ENST00000613455 IFFO1Q0D2I5 559 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 CRYMQ14894 314 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 CARD16Q5EG05 197 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 SLC44A3Q8N4M1 653 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 OR2A12Q8NGT7 310 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 CSGALNACT1Q8TDX6 532 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 RUFY1Q96T51 708 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 SH3GL2Q99962 352 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 KIFC1Q9BW19 673 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 CHRAC1Q9NRG0 131 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 RABGEF1Q9UJ41 708 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 SOX13Q9UN79 622 aa20.42■□□□□ 0.86
CPNE9-205ENST00000613455 TCF20Q9UGU0 1960 aaKnown RBP20.42■□□□□ 0.86
CPNE9-205ENST00000613455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 FAM237BA0A1B0GVD1 139 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 TBC1D3BA6NDS4 549 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 TRAFD1O14545 582 aaPredicted RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 HTRA2O43464 458 aaPredicted RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 TIMM44O43615 452 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 BNIP3LO60238 219 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 C1QAP02745 245 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 NNMTP40261 264 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 GRIA2P42262 883 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 MYLK3Q32MK0 819 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 CEP85LQ5SZL2 805 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 PTCRAQ6ISU1 281 aaPredicted RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 CES3Q6UWW8 571 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 TMEM135Q86UB9 458 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 PLPP6Q8IY26 295 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 CHST14Q8NCH0 376 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 GSDMBQ8TAX9 411 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 FBF1Q8TES7 1133 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 FCRL3Q96P31 734 aaPredicted RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 ACSS3Q9H6R3 686 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 FBRSL1Q9HCM7 1045 aaKnown RBP20.41■□□□□ 0.86
CPNE9-205ENST00000613455 TRPV5Q9NQA5 729 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 HCN2Q9UL51 889 aa20.41■□□□□ 0.86
CPNE9-205ENST00000613455 PLA2G4CQ9UP65 541 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms