RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 TEKT5Q96M29 485 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 C7orf26Q96N11 449 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 MRPS26Q9BYN8 205 aaKnown RBP16.66■□□□□ 0.26
CNOT3-208ENST00000613073 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
CNOT3-208ENST00000613073 COL6A2P12110 1019 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 NUMBP49757 651 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 SERPINB9P50453 376 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 C16orf46Q6P387 395 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 SMYD1Q8NB12 490 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-208ENST00000613073 OXCT2Q9BYC2 517 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-208ENST00000613073 SLC39A8Q9C0K1 460 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 BFARQ9NZS9 450 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 TRHDEQ9UKU6 1024 aa16.66■□□□□ 0.26
CNOT3-208ENST00000613073 GOLGA8TH3BQL2 631 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 TPP1O14773 563 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 MTSS1O43312 755 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 AP1G1O43747 822 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 STAMBPO95630 424 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 MT-CYBP00156 380 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ALDOAP04075 364 aaKnown RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 CDH2P19022 906 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 NCF2P19878 526 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ABCG1P45844 678 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 BTG3Q14201 252 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 PPP2R5DQ14738 602 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 BRMS1LQ5PSV4 323 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 VWA5B1Q5TIE3 1220 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 KCTD11Q693B1 232 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ITPRIPL1Q6GPH6 555 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 PATL1Q86TB9 770 aaKnown RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ARHGAP12Q8IWW6 846 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ATPAF2Q8N5M1 289 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 PXYLP1Q8TE99 480 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 GIPC3Q8TF64 312 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 CERS2Q96G23 380 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 BTBD9Q96Q07 612 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 AGAP2Q99490 1192 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 BRD8Q9H0E9 1235 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 C1orf21Q9H246 121 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 CHRAC1Q9NRG0 131 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 GMIPQ9P107 970 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 TXNDC16Q9P2K2 825 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 HS3ST4Q9Y661 456 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 MYO16Q9Y6X6 1858 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ENPP3O14638 875 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 TNFAIP8O95379 198 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ALOX15P16050 662 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 SELPP16109 830 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 MRPS22P82650 360 aaKnown RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 GPNMBQ14956 572 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 KDELC2Q7Z4H8 507 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 SLC43A3Q8NBI5 491 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ZFRQ96KR1 1074 aaKnown RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 TSEN34Q9BSV6 310 aaKnown RBP16.65■□□□□ 0.26
CNOT3-208ENST00000613073 NAT9Q9BTE0 207 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 FAIMQ9NVQ4 179 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 TMEM161AQ9NX61 479 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ADAM28Q9UKQ2 775 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 DNAJC16Q9Y2G8 782 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 PCDHB7Q9Y5E2 793 aa16.65■□□□□ 0.26
CNOT3-208ENST00000613073 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-208ENST00000613073 MTTPP55157 894 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 XIAPP98170 497 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 CYS1Q717R9 158 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 BEND5Q7L4P6 421 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 PQLC1Q8N2U9 271 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 GRIN3AQ8TCU5 1115 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF512Q96ME7 567 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-208ENST00000613073 LRRC40Q9H9A6 602 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 CASS4Q9NQ75 786 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 PCDHB5Q9Y5E4 795 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 CEPT1Q9Y6K0 416 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 VWA8A3KMH1 1905 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 E9PAM4 449 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 ITM2AO43736 263 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 CDKL1Q00532 357 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 EFEMP1Q12805 493 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 NFE2Q16621 373 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-208ENST00000613073 TFAP2DQ7Z6R9 452 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 MON1AQ86VX9 555 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 MIB1Q86YT6 1006 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 RNF148Q8N7C7 305 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 PPP4R1Q8TF05 950 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 DPF3Q92784 378 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 ABHD8Q96I13 439 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 ZNF778Q96MU6 729 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 SLX1AQ9BQ83 275 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 Q9H521 79 aa16.64■□□□□ 0.25
CNOT3-208ENST00000613073 COPS7BQ9H9Q2 264 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-208ENST00000613073 TMEM189-UBE2V1I3L0A0 370 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CPB1P15086 417 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 AOC1P19801 751 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 ITGAXP20702 1163 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 CYP2C18P33260 490 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 OXCT1P55809 520 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 STX3Q13277 289 aa16.63■□□□□ 0.25
CNOT3-208ENST00000613073 OGFRL1Q5TC84 451 aaPredicted RBP16.63■□□□□ 0.25
CNOT3-208ENST00000613073 FRMD7Q6ZUT3 714 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms