RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 CBLBQ13191 982 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 GPS2Q13227 327 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 SMAD1Q15797 465 aaKnown RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 LONRF1Q17RB8 773 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 SKIDA1Q1XH10 827 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 FUT11Q495W5 492 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 HSP90B2PQ58FF3 399 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 ATAT1Q5SQI0 421 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 ATXN7L2Q5T6C5 722 aaPredicted RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 NAPEPLDQ6IQ20 393 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 DENND5AQ6IQ26 1287 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 VITQ6UXI7 678 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 UNC5AQ6ZN44 842 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 C12orf40Q86WS4 652 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 KRT222Q8N1A0 295 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 BBS5Q8N3I7 341 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 SH2D3CQ8N5H7 860 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 FBF1Q8TES7 1133 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 OSCP1Q8WVF1 389 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 EDAQ92838 391 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 TADA1Q96BN2 335 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 OTUB2Q96DC9 234 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 STAMBPL1Q96FJ0 436 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 EBNA1BP2Q99848 306 aaKnown RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 KXD1Q9BQD3 176 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 C2orf49Q9BVC5 232 aaPredicted RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 FSD1LQ9BXM9 530 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 PLA2G2FQ9BZM2 168 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 POLR1EQ9GZS1 481 aaKnown RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 EBF3Q9H4W6 596 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 TMBIM4Q9HC24 238 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 NOD2Q9HC29 1040 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 BCCIPQ9P287 314 aaKnown RBP eCLIP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 LHX3Q9UBR4 397 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 CTNNAL1Q9UBT7 734 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 GGA2Q9UJY4 613 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 AAR2Q9Y312 384 aaKnown RBP8.19□□□□□ -1.1
TARDBP-213ENST00000611963 BPTFQ12830 3046 aa8.19□□□□□ -1.1
TARDBP-213ENST00000611963 EXOC1LA0A1B0GW35 172 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 CCDC78A2IDD5 438 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 GOLGA6L10A6NI86 522 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 GOLGA8KD6RF30 607 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 POC1B-GALNT4F8VUJ3 575 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 RASGRF2O14827 1237 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 INSIG1O15503 277 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ATP9BO43861 1147 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ADH1CP00326 375 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 MYZAPP0CAP1 466 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 PABPC1P11940 636 aaKnown RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 SERPINH1P50454 418 aaKnown RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 SCNN1BP51168 640 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 RHOAP61586 193 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ZXDAP98168 799 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 MPP3Q13368 585 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 GRM2Q14416 872 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 RFTN1Q14699 578 aaPredicted RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 STEAP4Q687X5 459 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 KCTD16Q68DU8 428 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ALG1LQ6GMV1 187 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 TRMT10BQ6PF06 316 aaKnown RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 C3orf62Q6ZUJ4 267 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 LINC00523Q86TU6 105 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 UNC5BQ8IZJ1 945 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ADGRG2Q8IZP9 1017 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 GOLGA6L1Q8N7Z2 621 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 TTC8Q8TAM2 541 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 RPL10LQ96L21 214 aaKnown RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 RIPOR3Q96MK2 946 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 PPP1R2P1Q96PQ5 205 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 PSKH2Q96QS6 385 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 XPO6Q96QU8 1125 aaKnown RBP8.18□□□□□ -1.1
TARDBP-213ENST00000611963 TMEM109Q9BVC6 243 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 TM6SF2Q9BZW4 377 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 TRPV4Q9HBA0 871 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 ZFP14Q9HCL3 533 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 MED4Q9NPJ6 270 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 HPS4Q9NQG7 708 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 BFARQ9NZS9 450 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 OGFRQ9NZT2 677 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
TARDBP-213ENST00000611963 SCN8AQ9UQD0 1980 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 TCRBV9S1A1TA0A576 114 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 OTOL1A6NHN0 477 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-213ENST00000611963 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-213ENST00000611963 FOXO6A8MYZ6 492 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 POLR3GO15318 223 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-213ENST00000611963 HOXC11O43248 304 aaPredicted RBP8.17□□□□□ -1.1
TARDBP-213ENST00000611963 NFATC1O95644 943 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 S1PR4O95977 384 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 PRKCGP05129 697 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 ASGR2P07307 311 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 IVLP07476 585 aa8.17□□□□□ -1.1
TARDBP-213ENST00000611963 SERPINF2P08697 491 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms