RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TNIP3Q96KP6 325 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 GPR22Q99680 433 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 PAAF1Q9BRP4 392 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 IL22Q9GZX6 179 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 EIF2B3Q9NR50 452 aaKnown RBP20.59■□□□□ 0.89
SSBP3-216ENST00000610401 BTRCQ9Y297 605 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 CASTOR2A6NHX0 329 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 TRIM38O00635 465 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 NCK1P16333 377 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 TRIM25Q14258 630 aaKnown RBP20.59■□□□□ 0.89
SSBP3-216ENST00000610401 PLCL1Q15111 1095 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 CBR4Q8N4T8 237 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 HMGCLL1Q8TB92 370 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 STYXQ8WUJ0 223 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 KCNA7Q96RP8 456 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 COLEC11Q9BWP8 271 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 DMTF1Q9Y222 760 aa20.59■□□□□ 0.89
SSBP3-216ENST00000610401 PRSS51A0A1B0GVH4 220 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 ENTPD1P49961 510 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 SLC26A2P50443 739 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 CCNA1P78396 465 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 ECT2LQ008S8 904 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 SULT2A1Q06520 285 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 SCAMP5Q8TAC9 235 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 OLFM1Q99784 485 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 TMEM165Q9HC07 324 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 CACNA2D2Q9NY47 1150 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 CEPT1Q9Y6K0 416 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 HEATR9A2RTY3 570 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 MTHFD1P11586 935 aaKnown RBP20.58■□□□□ 0.89
SSBP3-216ENST00000610401 TMEM259Q4ZIN3 620 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 NOTUMQ6P988 496 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 PDZD4Q76G19 769 aaPredicted RBP20.58■□□□□ 0.89
SSBP3-216ENST00000610401 ANKRD49Q8WVL7 239 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 CNDP1Q96KN2 507 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 KLHL5Q96PQ7 755 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 ARHGEF38Q9NXL2 777 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 ADAM28Q9UKQ2 775 aa20.58■□□□□ 0.89
SSBP3-216ENST00000610401 UBQLN1Q9UMX0 589 aaKnown RBP20.58■□□□□ 0.89
SSBP3-216ENST00000610401 NCF1BA6NI72 391 aaPredicted RBP20.58■□□□□ 0.88
SSBP3-216ENST00000610401 NCF1CA8MVU1 366 aaPredicted RBP20.58■□□□□ 0.88
SSBP3-216ENST00000610401 CYP2C9P11712 490 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 NCF1P14598 390 aaPredicted RBP20.58■□□□□ 0.88
SSBP3-216ENST00000610401 NR4A1P22736 598 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 CUZD1Q86UP6 607 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 UNC93AQ86WB7 457 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 SPPL2BQ8TCT7 592 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 SLCO4A1Q96BD0 722 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 RMND5BQ96G75 393 aaPredicted RBP20.58■□□□□ 0.88
SSBP3-216ENST00000610401 PCED1BQ96HM7 432 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 HSFY1Q96LI6 401 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 C3orf30Q96M34 536 aa20.58■□□□□ 0.88
SSBP3-216ENST00000610401 WDR6Q9NNW5 1121 aaKnown RBP20.58■□□□□ 0.88
SSBP3-216ENST00000610401 STRNO43815 780 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 PRDX6P30041 224 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 KCNC1P48547 511 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 APLP1P51693 650 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 NR1H2P55055 460 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 FAM187BQ17R55 369 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 GPR158Q5T848 1215 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 ZFP1Q6P2D0 407 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 DPP9Q86TI2 863 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 FBXL20Q96IG2 436 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 TEKT5Q96M29 485 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 MRPL46Q9H2W6 279 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 GPRC5DQ9NZD1 345 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 RSL24D1Q9UHA3 163 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 EVLQ9UI08 416 aaPredicted RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 CNOT6Q9ULM6 557 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 TSPAN3O60637 253 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 GJB3O75712 270 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 HMGB2P26583 209 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 NSUN2Q08J23 767 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 PAFAH1B3Q15102 231 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 AHI1Q8N157 1196 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 DNAJB14Q8TBM8 379 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 ESAMQ96AP7 390 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 RBM38Q9H0Z9 239 aaKnown RBP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 RBM22Q9NW64 420 aaKnown RBP eCLIP20.57■□□□□ 0.88
SSBP3-216ENST00000610401 KCTD3Q9Y597 815 aa20.57■□□□□ 0.88
SSBP3-216ENST00000610401 DAB1O75553 588 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 BDNFP23560 247 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 NEDD8Q15843 81 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 NAPEPLDQ6IQ20 393 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 HMBOX1Q6NT76 420 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 DUS1LQ6P1R4 473 aaKnown RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 ANKRD23Q86SG2 305 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 GAB3Q8WWW8 586 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 HDAC11Q96DB2 347 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 PABPC5Q96DU9 382 aaKnown RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 ZFRQ96KR1 1074 aaKnown RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 SEPHS2Q99611 448 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CRTAC1Q9NQ79 661 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 ZIK1Q3SY52 487 aaPredicted RBP20.56■□□□□ 0.88
SSBP3-216ENST00000610401 CRYBG2Q8N1P7 616 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 LRRC43Q8N309 656 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 TTC39CQ8N584 583 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 OR6J1Q8NGC5 347 aa20.56■□□□□ 0.88
SSBP3-216ENST00000610401 DTNBP1Q96EV8 351 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms