RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 IGFALSP35858 605 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 SRSF1Q07955 248 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■□□□□ 9.8
CHMP4A-211ENST00000609024 TMEM164Q5U3C3 297 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 ZNF354CQ86Y25 554 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 PLPP6Q8IY26 295 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 ZNF683Q8IZ20 524 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 OR2AP1Q8NGE2 309 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 SPATA20Q8TB22 786 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 KLHL32Q96NJ5 620 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 CMKLR1Q99788 373 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 EPAS1Q99814 870 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 SEMA3CQ99985 751 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 EDEM3Q9BZQ6 932 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 LRRN3Q9H3W5 708 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 ANLNQ9NQW6 1124 aa17.59■□□□□ 0.41
CHMP4A-211ENST00000609024 IGLV3-10A0A075B6K4 115 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 CASC3O15234 703 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 NOBOXO60393 691 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 ZMPSTE24O75844 475 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 CCKBRP32239 447 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 HK3P52790 923 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 MAPK10P53779 464 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 STX17P56962 302 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 SLC25A52Q3SY17 297 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 FAM102AQ5T9C2 384 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 GJB7Q6PEY0 223 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 ENPP7Q6UWV6 458 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 GBP6Q6ZN66 633 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 VASH2Q86V25 355 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 Q8N9G6 341 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 PGAP3Q96FM1 320 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 HAPLN3Q96S86 360 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 TBCBQ99426 244 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 APEX2Q9UBZ4 518 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 ZDHHC9Q9Y397 364 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 PCDHGA4Q9Y5G9 962 aa17.58■□□□□ 0.4
CHMP4A-211ENST00000609024 BECN2A8MW95 431 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 GSRP00390 522 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TFE3P19532 575 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 PEX5P50542 639 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 SRSF6Q13247 344 aaKnown RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 LRRC14Q15048 493 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TBR1Q16650 682 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 KLHL40Q2TBA0 621 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 MYLK3Q32MK0 819 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 PTPN20Q4JDL3 420 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 OTUD1Q5VV17 481 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 RWDD4Q6NW29 188 aaKnown RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 FOXR2Q6PJQ5 311 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 GDPD4Q6W3E5 623 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 CCNJLQ8IV13 435 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TSACCQ96A04 125 aaPredicted RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TIGD1Q96MW7 591 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 WRAP53Q9BUR4 548 aaKnown RBP17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 SLC25A18Q9H1K4 315 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 TMPRSS4Q9NRS4 437 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 MAN1B1Q9UKM7 699 aa17.57■□□□□ 0.4
CHMP4A-211ENST00000609024 PRAMEF33A0A0G2JMD5 474 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 CXorf51AA0A1B0GTR3 108 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 PRAMEF10O60809 474 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 TNFP01375 233 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 CELA2BP08218 269 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 ITGB6P18564 788 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 ITIH1P19827 911 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 CD82P27701 267 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 MARSP56192 900 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 TLE1Q04724 770 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 PAK1Q13153 545 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 ARHGEF7Q14155 803 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 LRRC73Q5JTD7 316 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 PHF19Q5T6S3 580 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 ZFAND4Q86XD8 727 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 C18orf8Q96DM3 657 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 GDAP1L1Q96MZ0 367 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 PLCB1Q9NQ66 1216 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 MBNL1Q9NR56 388 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 PPARGC1AQ9UBK2 798 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 KLQ9UEF7 1012 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 RABGEF1Q9UJ41 708 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 ACTL7AQ9Y615 435 aa17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 UBR5O95071 2799 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-211ENST00000609024 A0A1W2PQM1 296 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 I6L893 689 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 SLC9A1P19634 815 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 ACVRL1P37023 503 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 BPIFB4P59827 614 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 ELP6Q0PNE2 266 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 IRF4Q15306 451 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 EXOC3L4Q17RC7 722 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 TP53I13Q8NBR0 393 aaPredicted RBP17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 SHC3Q92529 594 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 ARHGEF2Q92974 986 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 USP7Q93009 1102 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 NT5C3BQ969T7 300 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 NCAPGQ9BPX3 1015 aa17.55■□□□□ 0.4
CHMP4A-211ENST00000609024 DNAI1Q9UI46 699 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms