RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CERCAMQ5T4B2 595 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 DCAF12Q5T6F0 453 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 MACC1Q6ZN28 852 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PARS2Q7L3T8 475 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 NLGN4XQ8N0W4 816 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 RYBPQ8N488 228 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 NLGN4YQ8NFZ3 816 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 OR6C4Q8NGE1 309 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CCL4L1Q8NHW4 92 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 TFAP2BQ92481 460 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PPP1R16AQ96I34 528 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CCDC114Q96M63 670 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SERPINB11Q96P15 392 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 HAPLN3Q96S86 360 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PSMB7Q99436 277 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PRMT1Q99873 361 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SPON2Q9BUD6 331 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 WRAP53Q9BUR4 548 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 LRRC27Q9C0I9 530 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SIK2Q9H0K1 926 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 TNMDQ9H2S6 317 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 ZDHHC6Q9H6R6 413 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 MRPL40Q9NQ50 206 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 TMEM9Q9P0T7 183 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 CGNQ9P2M7 1197 aaKnown RBP9.4□□□□□ -0.9
CTCFL-220ENST00000608858 SLC12A6Q9UHW9 1150 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 FRMD4BQ9Y2L6 1034 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 OR1A2Q9Y585 309 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 PCDHGA3Q9Y5H0 932 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 WASF2Q9Y6W5 498 aa9.4□□□□□ -0.9
CTCFL-220ENST00000608858 NAV3Q8IVL0 2385 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 AKAP9Q99996 3911 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 A0A0D9SEW6 157 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 TCAF2A6NFQ2 919 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 C16orf96A6NNT2 1141 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 TSPAN6O43657 245 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 ZNF821O75541 412 aaPredicted RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 RASGRP1O95267 797 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 TNFP01375 233 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 MAP4P27816 1152 aaKnown RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 CD1CP29017 333 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 PPM1FP49593 454 aaPredicted RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 BLKP51451 505 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 COPB1P53618 953 aaKnown RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 YPEL5P62699 121 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 KRT83P78385 493 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 AMPD3Q01432 767 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 LRMPQ12912 555 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 AUHQ13825 339 aaKnown RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 EDRF1Q3B7T1 1238 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 RABGAP1LQ5R372 815 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 OGFOD3Q6PK18 319 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 UNC13DQ70J99 1090 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 TTC7BQ86TV6 843 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 MCEMP1Q8IX19 187 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 ATP6V0D2Q8N8Y2 350 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 SLC35F5Q8WV83 523 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 IRGQQ8WZA9 623 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 FUBP1Q96AE4 644 aaKnown RBP9.39□□□□□ -0.91
CTCFL-220ENST00000608858 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 C7orf25Q9BPX7 421 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 HEPHQ9BQS7 1158 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 B3GNT4Q9C0J1 378 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 VPS51Q9UID3 782 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 MOSPD1Q9UJG1 213 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 HS3ST2Q9Y278 367 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 SNX10Q9Y5X0 201 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 SVILO95425 2214 aa9.39□□□□□ -0.91
CTCFL-220ENST00000608858 CDC14CA4D256 554 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 RHPN2P1A8MT19 583 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 O00370 1275 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 HNRNPRO43390 633 aaKnown RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TM7SF2O76062 418 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 ADCY5O95622 1261 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 STK4Q13043 487 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 NNTQ13423 1086 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 CUL4BQ13620 913 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 INPP5AQ14642 412 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TAF5Q15542 800 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 C14orf28Q4W4Y0 310 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 CARD16Q5EG05 197 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 FOXR2Q6PJQ5 311 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 BRAPQ7Z569 592 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 XYLT1Q86Y38 959 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 IRF2BP1Q8IU81 584 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 AGBL5Q8NDL9 886 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms