RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 PLK1P53350 603 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 SLC5A3P53794 718 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 SLC12A2P55011 1212 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 XIAPP98170 497 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PDK3Q15120 406 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 GNASQ5JWF2 1037 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 SCD5Q86SK9 330 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PGAM4Q8N0Y7 254 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PDCD6IPQ8WUM4 868 aaKnown RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 OLFM1Q99784 485 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 MRPL57Q9BQC6 102 aaKnown RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 FAM192AQ9GZU8 254 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 EFCAB1Q9HAE3 211 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 NMRK2Q9NPI5 230 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 ABCC13Q9NSE7 274 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 IGSF5Q9NSI5 407 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 TTC24A2A3L6 582 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 CPB1P15086 417 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 HOXC13P31276 330 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 GRIK1P39086 918 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 WNT3AP56704 352 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 MAXP61244 160 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 BRMS1LQ5PSV4 323 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 ARHGAP39Q9C0H5 1083 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 COPS7BQ9H9Q2 264 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 C6orf203Q9P0P8 240 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PCDHGB4Q9UN71 923 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 HS3ST4Q9Y661 456 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
SRGAP2-209ENST00000604247 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 MIA3Q5JRA6 1907 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 KCNU1A8MYU2 1149 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 E9PAM4 449 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 SLC22A2O15244 555 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 FGF10O15520 208 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 NPHS1O60500 1241 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 PAMP19021 973 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 ADSLP30566 484 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 CD52P31358 61 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 POLD2P49005 469 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 CAP1Q01518 475 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 TLR1Q15399 786 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 MAP3K21Q5TCX8 1036 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 OVOS1Q6IE37 1185 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 UGT2A3Q6UWM9 527 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 GK5Q6ZS86 529 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 LDB1Q86U70 411 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 ST13P4Q8IZP2 240 aaPredicted RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 LILRA2Q8N149 483 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 SCML4Q8N228 414 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 MAELQ96JY0 434 aaKnown RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 CLIC5Q9NZA1 410 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 VPS28Q9UK41 221 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 Q9Y3F1 56 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 TDRD15B5MCY1 1934 aaKnown RBP13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 PTPRDP23468 1912 aa13.09□□□□□ -0.31
SRGAP2-209ENST00000604247 CCL22O00626 93 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 TADA2AO75478 443 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 CYP11A1P05108 521 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 ME2P23368 584 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 ATP5F1P24539 256 aaPredicted RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 DNAJB1P25685 340 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 POU4F1Q01851 419 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 SULT2A1Q06520 285 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 TRIM32Q13049 653 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 IRF5Q13568 498 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 GRM2Q14416 872 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 IHHQ14623 411 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 CNPY1Q3B7I2 92 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 KIAA0930Q6ICG6 404 aaPredicted RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 PCDH20Q8N6Y1 951 aaKnown RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 SPPL2BQ8TCT7 592 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 RSPH1Q8WYR4 309 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 PHF21BQ96EK2 531 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 LRGUKQ96M69 825 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 SMOC2Q9H3U7 446 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 NOL6Q9H6R4 1146 aaKnown RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 PADI3Q9ULW8 664 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 NLRC5Q86WI3 1866 aa13.08□□□□□ -0.31
SRGAP2-209ENST00000604247 A0A087X1B8 175 aa13.08□□□□□ -0.32
SRGAP2-209ENST00000604247 TNFRSF10BO14763 440 aa13.08□□□□□ -0.32
SRGAP2-209ENST00000604247 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
SRGAP2-209ENST00000604247 HDCP19113 662 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms