RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 SP110Q9HB58 689 aa18.33■□□□□ 0.52
CCDC12-208ENST00000603885 CWC15Q9P013 229 aaKnown RBP18.33■□□□□ 0.52
CCDC12-208ENST00000603885 PLXNB3Q9ULL4 1909 aa18.33■□□□□ 0.52
CCDC12-208ENST00000603885 ARID1BQ8NFD5 2236 aaPredicted RBP18.33■□□□□ 0.52
CCDC12-208ENST00000603885 DMXL2Q8TDJ6 3036 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 H3BRJ5 948 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 DFFAO00273 331 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 INSIG1O15503 277 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 PIGNO95427 931 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 GYPCP04921 128 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 DGKAP23743 735 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 ARL4AP40617 200 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 ACADVLP49748 655 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 SUOXP51687 545 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 DPYSQ14117 519 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 NFKBIBQ15653 356 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 SMAD1Q15797 465 aaKnown RBP18.32■□□□□ 0.52
CCDC12-208ENST00000603885 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 AFMIDQ63HM1 303 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 ARHGAP12Q8IWW6 846 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 LZTR1Q8N653 840 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 NPWQ8N729 165 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 HCAR2Q8TDS4 363 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 CXorf40AQ8TE69 158 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 KLF6Q99612 283 aaPredicted RBP18.32■□□□□ 0.52
CCDC12-208ENST00000603885 GPR27Q9NS67 375 aa18.32■□□□□ 0.52
CCDC12-208ENST00000603885 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.32■□□□□ 0.524e-8■■■■□ 22.1
CCDC12-208ENST00000603885 GOLGA4Q13439 2230 aaKnown RBP18.31■□□□□ 0.52
CCDC12-208ENST00000603885 A0A087X0T9 212 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 PALMO75781 387 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 PIAS2O75928 621 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 FAM228BP0C875 321 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 TIMP2P16035 220 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 CKMT2P17540 419 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 IL1R2P27930 398 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 ELP6Q0PNE2 266 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 ZNF211Q13398 564 aaPredicted RBP18.31■□□□□ 0.52
CCDC12-208ENST00000603885 DPYSL2Q16555 572 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 SMTNL2Q2TAL5 461 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 CFAP58Q5T655 872 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 PARGQ86W56 976 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 SLC25A45Q8N413 288 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 NIPA2Q8N8Q9 360 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 TSC1Q92574 1164 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 HSPH1Q92598 858 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 TUBGCP5Q96RT8 1024 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 NUP85Q9BW27 656 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 C1QTNF7Q9BXJ2 289 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 SUV39H2Q9H5I1 410 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 DNAJC28Q9NX36 388 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 IP6K2Q9UHH9 426 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 IPO11Q9UI26 975 aaKnown RBP18.31■□□□□ 0.52
CCDC12-208ENST00000603885 ANAPC7Q9UJX3 599 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 CFAP47Q6ZTR5 3102 aa18.31■□□□□ 0.52
CCDC12-208ENST00000603885 SPTY2D1-AS1A0A0U1RR47 76 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TSPAN11A1L157 253 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TRIM38O00635 465 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 SIGLEC6O43699 453 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 MMP20O60882 483 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TM7SF2O76062 418 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 CYP1A2P05177 515 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TCF4P15884 667 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 CASP14P31944 242 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 CSNK1DP48730 415 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 HNRNPKP61978 463 aaKnown RBP eCLIP18.3■□□□□ 0.529e-7■■□□□ 12.7
CCDC12-208ENST00000603885 IL10RBQ08334 325 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 ILKQ13418 452 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 FZD2Q14332 565 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 RFTN1Q14699 578 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 PROX2Q3B8N5 592 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 ALKBH5Q6P6C2 394 aaKnown RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TMPRSS12Q86WS5 348 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 TSEN2Q8NCE0 465 aaKnown RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 OR4C6Q8NH72 309 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 ZNF641Q96N77 438 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 WRAP53Q9BUR4 548 aaKnown RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 CINPQ9BW66 212 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 XPO4Q9C0E2 1151 aaKnown RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 CCDC86Q9H6F5 360 aaKnown RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 UCKL1Q9NWZ5 548 aa18.3■□□□□ 0.52
CCDC12-208ENST00000603885 ANKRD11Q6UB99 2663 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-208ENST00000603885 FAM149AA5PLN7 773 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 NEMP2A6NFY4 417 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 H3BM21 787 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 FFAR2O15552 330 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 RARAP10276 462 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 ALPPL2P10696 532 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 NME1P15531 152 aaKnown RBP18.29■□□□□ 0.52
CCDC12-208ENST00000603885 ITIH2P19823 946 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 SERPINA4P29622 427 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 HNF1BP35680 557 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 PFN3P60673 137 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 PDE1CQ14123 709 aaPredicted RBP18.29■□□□□ 0.52
CCDC12-208ENST00000603885 TMEM52BQ4KMG9 183 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 ZNF542PQ5EBM4 170 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 CCDC122Q5T0U0 273 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 BRAT1Q6PJG6 821 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 TMCO3Q6UWJ1 677 aa18.29■□□□□ 0.52
CCDC12-208ENST00000603885 ARHGAP36Q6ZRI8 547 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms