RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 UGT1A10Q9HAW8 530 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 UGT1A8Q9HAW9 530 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TXNDC16Q9P2K2 825 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PRR23AA6NEV1 266 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 XPO1O14980 1071 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SYNCRIPO60506 623 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MTX2O75431 263 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DNAJB5O75953 348 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TOMM70O94826 608 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PLGP00747 810 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KRT7P08729 469 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 THRAP10827 490 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CPB1P15086 417 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PGM1P36871 562 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 BMPR1AP36894 532 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC26A2P50443 739 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CCT4P50991 539 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 HK2P52789 917 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 YWHAGP61981 247 aaKnown RBP eCLIP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TAP1Q03518 808 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PRKCQQ04759 706 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ITGADQ13349 1161 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ACAP2Q15057 778 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MAPK6Q16659 721 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KCNT1Q5JUK3 1230 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 RNASEH2BQ5TBB1 312 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 AGAP7PQ5VUJ5 663 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 KIAA1841Q6NSI8 718 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TTI2Q6NXR4 508 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TRAT1Q6PIZ9 186 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DEGS2Q6QHC5 323 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 FRA10AC1Q70Z53 315 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 RAB44Q7Z6P3 723 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CHERPQ8IWX8 916 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SRRM1Q8IYB3 904 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 GRAMD1CQ8IYS0 662 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 AHI1Q8N157 1196 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SRBD1Q8N5C6 995 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ICA1LQ8NDH6 482 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 GRK7Q8WTQ7 553 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF296Q8WUU4 475 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC9A6Q92581 669 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 USP13Q92995 863 aaPredicted RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 BTBD9Q96Q07 612 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SECISBP2Q96T21 854 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MNTQ99583 582 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC30A3Q99726 388 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DCUN1D5Q9BTE7 237 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 TUBB6Q9BUF5 446 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 LRRC2Q9BYS8 371 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SMYD3Q9H7B4 428 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ZNF696Q9H7X3 374 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 SLC52A2Q9HAB3 445 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 C11orf16Q9NQ32 467 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DECR2Q9NUI1 292 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 DNAJC17Q9NVM6 304 aaKnown RBP4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ASNSD1Q9NWL6 643 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 ASIC3Q9UHC3 531 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 BCAP29Q9UHQ4 241 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 MAD2L2Q9UI95 211 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PPM1HQ9ULR3 514 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 VPS4AQ9UN37 437 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 CTNND2Q9UQB3 1225 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 AURKCQ9UQB9 309 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 PITPNM2Q9BZ72 1349 aa4.78□□□□□ -1.64
LINC01109-201ENST00000603837 LAMA4Q16363 1823 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KCNJ18B7U540 433 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 GPR89AB7ZAQ6 455 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 J3QRK9 145 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 RASGRF2O14827 1237 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 NDUFS6O75380 124 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 RECQL4O94761 1208 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SOD2P04179 222 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 UBTFL1P0CB47 393 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 GPR89BP0CG08 455 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 GRNP28799 593 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 NUDT1P36639 197 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 NCKAP1LP55160 1127 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PCBP4P57723 403 aaKnown RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 HTD2P86397 168 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 TNFAIP2Q03169 654 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 TDGQ13569 410 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 APOFQ13790 326 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KCNJ12Q14500 433 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 KYNUQ16719 465 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 CYP27C1Q4G0S4 372 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF468Q5VIY5 522 aaPredicted RBP4.77□□□□□ -1.65
LINC01109-201ENST00000603837 PGM2L1Q6PCE3 622 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 APOA5Q6Q788 366 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 B3GNT9Q6UX72 402 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 HTR3DQ70Z44 454 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 ZNF765Q7L2R6 523 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 DHDDSQ86SQ9 333 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 UNC45BQ8IWX7 931 aa4.77□□□□□ -1.65
LINC01109-201ENST00000603837 SLC43A2Q8N370 569 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms