RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	EIF4A3	P38919	411 aa	Known RBP	13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	SNX16	P57768	344 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	PAK1	Q13153	545 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	GBP6	Q6ZN66	633 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	VPS36	Q86VN1	386 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	NLRP14	Q86W24	1093 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	XYLT1	Q86Y38	959 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	IRF2BP1	Q8IU81	584 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	DRC7	Q8IY82	874 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM71A	Q8IYT1	594 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	FBXO39	Q8N4B4	442 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	ARL10	Q8N8L6	244 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	KY	Q8NBH2	561 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	OR2AP1	Q8NGE2	309 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	EXTL1	Q92935	676 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	CCDC74A	Q96AQ1	378 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	SGF29	Q96ES7	293 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	SEMA3C	Q99985	751 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	SLC13A1	Q9BZW2	595 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	TRIM4	Q9C037	500 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	TMEM51	Q9NW97	253 aa		13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	HOOK1	Q9UJC3	728 aa	Known RBP	13.58	□□□□□ -0.24
TIMM50-219	ENST00000602265	NVL	O15381	856 aa	Known RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	SUV39H1	O43463	412 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	MMP20	O60882	483 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	UGT2B4	P06133	528 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	LIPC	P11150	499 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	WT1	P19544	449 aa	Predicted RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	KRT9	P35527	623 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	HK3	P52790	923 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	CCL7	P80098	99 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	NFKB2	Q00653	900 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	NRG1	Q02297	640 aa	Predicted RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	PPARD	Q03181	441 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	MYLK3	Q32MK0	819 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	RAB6C	Q53S08	254 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	LRRC73	Q5JTD7	316 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAXC	Q5TGI0	409 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	ESRP1	Q6NXG1	681 aa	Known RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	LVRN	Q6Q4G3	990 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	SDR16C5	Q8N3Y7	309 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	FSTL5	Q8N475	847 aa	Predicted RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	PCDH19	Q8TAB3	1148 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	C18orf8	Q96DM3	657 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	ARHGEF26	Q96DR7	871 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	KLHL32	Q96NJ5	620 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	EPAS1	Q99814	870 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	OSBPL1A	Q9BXW6	950 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	EDEM3	Q9BZQ6	932 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	FOXP3	Q9BZS1	431 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM117A	Q9C073	453 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	RAB6C	Q9H0N0	254 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	SYNC	Q9H7C4	482 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	EPB41L5	Q9HCM4	733 aa		13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	ZFC3H1	O60293	1989 aa	Known RBP	13.57	□□□□□ -0.24
TIMM50-219	ENST00000602265	BIN1	O00499	593 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	KRIT1	O00522	736 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	NEMP1	O14524	444 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	TM7SF2	O76062	418 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	GJB6	O95452	261 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	POP4	O95707	220 aa	Known RBP	13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	RPLP0	P05388	317 aa	Known RBP	13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	TIMP2	P16035	220 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	PEX5	P50542	639 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	INHBC	P55103	352 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	ZFP36L1	Q07352	338 aa	Known RBP	13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	IRF4	Q15306	451 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	EXOC3L4	Q17RC7	722 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	ALG11	Q2TAA5	492 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	KLHL40	Q2TBA0	621 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	C2CD6	Q53TS8	623 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	KCTD16	Q68DU8	428 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	USP53	Q70EK8	1073 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	ARC	Q7LC44	396 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM131B	Q86XD5	332 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	DTX1	Q86Y01	620 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	GPR156	Q8NFN8	814 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	CFAP57	Q96MR6	1250 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	GFM1	Q96RP9	751 aa	Known RBP	13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	MAGEB5	Q9BZ81	275 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	GULP1	Q9UBP9	304 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	DNAJC12	Q9UKB3	198 aa		13.56	□□□□□ -0.24
TIMM50-219	ENST00000602265	GOLGA6L4	A6NEF3	574 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM72C	H0Y354	149 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	TMX2-CTNND1	H3BSU7	103 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	ETV5	P41161	510 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	MAPKAPK2	P49137	400 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	SNRPD1	P62314	119 aa	Known RBP	13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	WSCD2	Q2TBF2	565 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	TMEM52B	Q4KMG9	183 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	COLEC12	Q5KU26	742 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM72A	Q5TYM5	149 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM72D	Q6L9T8	149 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	GDPD4	Q6W3E5	623 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	TTC7B	Q86TV6	843 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	FAM72B	Q86X60	149 aa		13.55	□□□□□ -0.24
TIMM50-219	ENST00000602265	RYBP	Q8N488	228 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms