RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 IGDCC3Q8IVU1 814 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 SLC25A41Q8N5S1 370 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 SORCS1Q8WY21 1168 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 CFAP36Q96G28 342 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 MRGPRX3Q96LB0 322 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 ZIM3Q96PE6 472 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 LIMD1Q9UGP4 676 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 RAI2Q9Y5P3 530 aa22.81■■□□□ 1.24
IRF3-228ENST00000601291 A0A087WUV0 522 aaPredicted RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 PRRT4C9JH25 899 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 APODP05090 189 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 FGF1P05230 155 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 GSTA2P09210 222 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 PGAM1P18669 254 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 FAM193AP78312 1265 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 CARD16Q5EG05 197 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 CERCAMQ5T4B2 595 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 PTCRAQ6ISU1 281 aaPredicted RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 TRPV5Q9NQA5 729 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 EVLQ9UI08 416 aaPredicted RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 MAGEB16A2A368 324 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 KAT7O95251 611 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 NDST3O95803 873 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 TPH1P17752 444 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 GRIA2P42262 883 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 CHRNA4P43681 627 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 CRADDP78560 199 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 RAD51Q06609 339 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 BCL2L1Q07817 233 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 MESP2Q0VG99 397 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 PTPRNQ16849 979 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 SIRPB2Q5JXA9 342 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 UBAP2Q5T6F2 1119 aaKnown RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 ARMC3Q5W041 872 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 C3orf62Q6ZUJ4 267 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 SUGP1Q8IWZ8 645 aaKnown RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 PLPP6Q8IY26 295 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 KDM1BQ8NB78 822 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 UHMK1Q8TAS1 419 aaKnown RBP22.8■■□□□ 1.24
IRF3-228ENST00000601291 TUBGCP5Q96RT8 1024 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 TRIB3Q96RU7 358 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 ADGRE3Q9BY15 652 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 ATP13A3Q9H7F0 1226 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 PCDHGC4Q9Y5F7 938 aa22.8■■□□□ 1.24
IRF3-228ENST00000601291 BNIP3LO60238 219 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 ATXN1LP0C7T5 689 aaKnown RBP22.79■■□□□ 1.24
IRF3-228ENST00000601291 SSTR1P30872 391 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 GPX6P59796 221 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 GRM3Q14832 879 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 Q6ZVU0 165 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 SLC44A3Q8N4M1 653 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 PPHLN1Q8NEY8 458 aaKnown RBP22.79■■□□□ 1.24
IRF3-228ENST00000601291 OR6K2Q8NGY2 324 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 DNASE1L2Q92874 299 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 CHFRQ96EP1 664 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 CCDC77Q9BR77 488 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 CHKBQ9Y259 395 aa22.79■■□□□ 1.24
IRF3-228ENST00000601291 SOCS5O75159 536 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 POLBP06746 335 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 SERPINA4P29622 427 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 CCNHP51946 323 aaPredicted RBP22.78■■□□□ 1.24
IRF3-228ENST00000601291 TRAF2Q12933 501 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 GALNT3Q14435 633 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 MYLK3Q32MK0 819 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 FNDC3BQ53EP0 1204 aaKnown RBP22.78■■□□□ 1.24
IRF3-228ENST00000601291 PCID2Q5JVF3 399 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 NAIF1Q69YI7 327 aaPredicted RBP22.78■■□□□ 1.24
IRF3-228ENST00000601291 PDCD6IPQ8WUM4 868 aaKnown RBP22.78■■□□□ 1.24
IRF3-228ENST00000601291 PTCD2Q8WV60 388 aaKnown RBP22.78■■□□□ 1.24
IRF3-228ENST00000601291 RMDN1Q96DB5 314 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 MYO19Q96H55 970 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 NSMCE3Q96MG7 304 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 P2RY13Q9BPV8 354 aa22.78■■□□□ 1.24
IRF3-228ENST00000601291 BRWD1Q9NSI6 2320 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 TTC34A8MYJ7 566 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 POP4O95707 220 aaKnown RBP22.77■■□□□ 1.24
IRF3-228ENST00000601291 ALADP13716 330 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 STX2P32856 288 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 SOX9P48436 509 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 GPS2Q13227 327 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 STAT4Q14765 748 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 POU6F1Q14863 301 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 E2F5Q15329 346 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 ARMC12Q5T9G4 340 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 UNC5AQ6ZN44 842 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 PAF1Q8N7H5 531 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 LPCAT1Q8NF37 534 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 OR2W6PQ8NHA6 318 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 GSDMBQ8TAX9 411 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 FRS2Q8WU20 508 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 CPEB1Q9BZB8 566 aaKnown RBP22.77■■□□□ 1.24
IRF3-228ENST00000601291 SOX13Q9UN79 622 aa22.77■■□□□ 1.24
IRF3-228ENST00000601291 FAM237BA0A1B0GVD1 139 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 SHBGP04278 402 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 IVLP07476 585 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 STEAP4Q687X5 459 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 DPY19L3Q6ZPD9 716 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 CROCCP2Q86T23 111 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 ZDHHC6Q9H6R6 413 aa22.76■■□□□ 1.23
IRF3-228ENST00000601291 C8orf33Q9H7E9 229 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms