RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 GPR156Q8NFN8 814 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 OR6K2Q8NGY2 324 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 NAT6Q93015 286 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 C18orf8Q96DM3 657 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 FAM81BQ96LP2 452 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 TM6SF2Q9BZW4 377 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 ZYG11BQ9C0D3 744 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 NOL6Q9H6R4 1146 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 ATP13A1Q9HD20 1204 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 PPARGC1AQ9UBK2 798 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 APEX2Q9UBZ4 518 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 APOBEC3BQ9UH17 382 aaKnown RBP6.2□□□□□ -1.42
VRK3-220ENST00000600259 CTNND2Q9UQB3 1225 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 NBASA2RRP1 2371 aa6.2□□□□□ -1.42
VRK3-220ENST00000600259 USP9YO00507 2555 aaPredicted RBP6.19□□□□□ -1.42
VRK3-220ENST00000600259 BICDL2A1A5D9 508 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 D6RAR5 112 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 BIN1O00499 593 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TOR1BO14657 336 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 GSRP00390 522 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ITGB2P05107 769 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 HGFP14210 728 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ADRA1BP35368 520 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 KRT9P35527 623 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ETV5P41161 510 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 RPIAP49247 311 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 SULT1E1P49888 294 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 PEX5P50542 639 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ARSDP51689 593 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 HK3P52790 923 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 PPARDQ03181 441 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 PAK1Q13153 545 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 EIF3IQ13347 325 aaKnown RBP6.19□□□□□ -1.42
VRK3-220ENST00000600259 SPIDRQ14159 915 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 PTK2BQ14289 1009 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 AGERQ15109 404 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TBR1Q16650 682 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 EXOC3L4Q17RC7 722 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ALG11Q2TAA5 492 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 WSCD2Q2TBF2 565 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ZSCAN23Q3MJ62 389 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TMEM52BQ4KMG9 183 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 C2CD6Q53TS8 623 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 FAXCQ5TGI0 409 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 MACC1Q6ZN28 852 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 GBP6Q6ZN66 633 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 RAB11FIP2Q7L804 512 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ARCQ7LC44 396 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TMPRSS9Q7Z410 1059 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TTC7BQ86TV6 843 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 VPS36Q86VN1 386 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 FAM131BQ86XD5 332 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 SFTPA2Q8IWL1 248 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 DRC7Q8IY82 874 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 SDR16C5Q8N3Y7 309 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 FBXO39Q8N4B4 442 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 KYQ8NBH2 561 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 OR2AP1Q8NGE2 309 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 HTR3CQ8WXA8 447 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 CENPIQ92674 756 aaPredicted RBP6.19□□□□□ -1.42
VRK3-220ENST00000600259 EXTL1Q92935 676 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 GLMNQ92990 594 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TSACCQ96A04 125 aaPredicted RBP6.19□□□□□ -1.42
VRK3-220ENST00000600259 CCDC74AQ96AQ1 378 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 SGF29Q96ES7 293 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 CFAP57Q96MR6 1250 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 KLHL32Q96NJ5 620 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 EDEM3Q9BZQ6 932 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TRIM4Q9C037 500 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 KLC2Q9H0B6 622 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 LRRN3Q9H3W5 708 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 RETREG1Q9H6L5 497 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 ZDHHC6Q9H6R6 413 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TMEM51Q9NW97 253 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 TMEM248Q9NWD8 314 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 DKK3Q9UBP4 350 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 GULP1Q9UBP9 304 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 MFHAS1Q9Y4C4 1052 aa6.19□□□□□ -1.42
VRK3-220ENST00000600259 NOTCH2Q04721 2471 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 C9orf172C9J069 976 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 TMX2-CTNND1H3BSU7 103 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 KRIT1O00522 736 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 INSIG1O15503 277 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 B4GAT1O43505 415 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 KDELR3O43731 214 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 TM7SF2O76062 418 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 GJB6O95452 261 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 UGT2B4P06133 528 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 FAM87AP0C7U9 286 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 LIPCP11150 499 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 RHOQP17081 205 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 ITIH1P19827 911 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 THOP1P52888 689 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 INHBCP55103 352 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 SNX16P57768 344 aa6.18□□□□□ -1.42
VRK3-220ENST00000600259 SNRPD1P62314 119 aaKnown RBP6.18□□□□□ -1.42
VRK3-220ENST00000600259 B4GALNT1Q00973 533 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms