RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 NSMCE1Q8WV22 266 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 SPACA7Q96KW9 195 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 TEKT5Q96M29 485 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 ZNF641Q96N77 438 aaPredicted RBP13.89□□□□□ -0.19
VRK3-219ENST00000600137 SEMA3CQ99985 751 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 OSBPL1AQ9BXW6 950 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 SMG5Q9UPR3 1016 aaKnown RBP13.89□□□□□ -0.19
VRK3-219ENST00000600137 NCKAP1Q9Y2A7 1128 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 PCDHGC4Q9Y5F7 938 aa13.89□□□□□ -0.19
VRK3-219ENST00000600137 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 KIF5CO60282 957 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 SEMA4FO95754 770 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 IGHV4-34P06331 123 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 ADRB3P13945 408 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 TGM1P22735 817 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 EIF3EP60228 445 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 RPL6Q02878 288 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 SFSWAPQ12872 951 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 GRM3Q14832 879 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 ASCL5Q7RTU5 278 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 ZNF567Q8N184 647 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 OR14C36Q8NHC7 312 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 COG1Q8WTW3 980 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 HTR3CQ8WXA8 447 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 LOXL4Q96JB6 756 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 POLR1EQ9GZS1 481 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 KDM4CQ9H3R0 1056 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 TMEM74BQ9NUR3 256 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 DNPEPQ9ULA0 475 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 TTC7AQ9ULT0 858 aaPredicted RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 ZFR2Q9UPR6 939 aaKnown RBP13.88□□□□□ -0.19
VRK3-219ENST00000600137 FADS3Q9Y5Q0 445 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 SLCO1B1Q9Y6L6 691 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 PI4KAP42356 2102 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 TRPM6Q9BX84 2022 aa13.88□□□□□ -0.19
VRK3-219ENST00000600137 KNL1Q8NG31 2342 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 LRRK1Q38SD2 2015 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 PRR23AA6NEV1 266 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 H7C0C1 242 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 MAP3K13O43283 966 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 AP1G1O43747 822 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 LMNAP02545 664 aaKnown RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 PDHA1P08559 390 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 CES1P23141 567 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 ATP5OP48047 213 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 NEK3P51956 506 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 PPP2CBP62714 309 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 PPP2CAP67775 309 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 SKOR1P84550 965 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 BCL2L1Q07817 233 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 OASLQ15646 514 aaKnown RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 UGP2Q16851 508 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 SEL1L2Q5TEA6 688 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 PEAR1Q5VY43 1037 aaPredicted RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 PAPD7Q5XG87 772 aaKnown RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 LPCAT2Q7L5N7 544 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 BBS5Q8N3I7 341 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 OR2T34Q8NGX1 318 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 GANCQ8TET4 914 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 ATG4AQ8WYN0 398 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 NKD2Q969F2 451 aaPredicted RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 BIRC7Q96CA5 298 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 IMP4Q96G21 291 aaKnown RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 AGAP3Q96P47 875 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 GORASP1Q9BQQ3 440 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 PCED1AQ9H1Q7 454 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 GLOD4Q9HC38 313 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.87□□□□□ -0.19
VRK3-219ENST00000600137 PPIL1Q9Y3C6 166 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 FAM186AA6NE01 2351 aa13.87□□□□□ -0.19
VRK3-219ENST00000600137 GVINP1Q7Z2Y8 2422 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 MTSS1O43312 755 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 LATO43561 262 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 LIASO43766 372 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 CEP104O60308 925 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 SOCS5O75159 536 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 NDUFS2O75306 463 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 RHOBTB1O94844 696 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 EPN2O95208 641 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 FGGP02679 453 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 ITPKAP23677 461 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 MAOBP27338 520 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 MAPK8P45983 427 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 GNG11P61952 73 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PTPRRQ15256 657 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 TMEM259Q4ZIN3 620 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 LRRC73Q5JTD7 316 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 PLA2G2CQ5R387 149 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 CCDC181Q5TID7 509 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 KIAA0895LQ68EN5 471 aa13.86□□□□□ -0.19
VRK3-219ENST00000600137 LAIR1Q6GTX8 287 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms