RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 NSMCE3Q96MG7 304 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 CEP41Q9BYV8 373 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 SLC6A17Q9H1V8 727 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 SEPT10Q9P0V9 454 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 HECAQ9UBI9 543 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-205ENST00000600117 AMACRQ9UHK6 382 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 ATP8A1Q9Y2Q0 1164 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 WASF2Q9Y6W5 498 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 TMEM8BA6NDV4 472 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 RNF103O00237 685 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 INSIG1O15503 277 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 GJB3O75712 270 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 APBB3O95704 486 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 IGSF6O95976 241 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 NDUFV2P19404 249 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 GKP32189 559 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 CHRNA3P32297 505 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 RECQLP46063 649 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-205ENST00000600117 MAXP61244 160 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 RPS14P62263 151 aaKnown RBP19.08■□□□□ 0.64
CCDC9-205ENST00000600117 MYLK3Q32MK0 819 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 TEX44Q53QW1 395 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 DRICH1Q6PGQ1 229 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-205ENST00000600117 TMPRSS6Q8IU80 811 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 CAMKK1Q8N5S9 505 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 CAPZA3Q96KX2 299 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 NAP1L3Q99457 506 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-205ENST00000600117 HEPHQ9BQS7 1158 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 SMOC1Q9H4F8 434 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 EVLQ9UI08 416 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-205ENST00000600117 PPM1HQ9ULR3 514 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 WASF3Q9UPY6 502 aa19.08■□□□□ 0.64
CCDC9-205ENST00000600117 TTC24A2A3L6 582 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 PDE2AO00408 941 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 KCNN4O15554 427 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 POP4O95707 220 aaKnown RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 PXNP49023 591 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 NOVA1P51513 510 aaKnown RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 SNX1Q13596 522 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 BYSLQ13895 437 aaKnown RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 CYP1B1Q16678 543 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF776Q68DI1 518 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 ANO7Q6IWH7 933 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 SRLQ86TD4 932 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 MMAAQ8IVH4 418 aaKnown RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF567Q8N184 647 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 MDGA1Q8NFP4 955 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 HMGB4Q8WW32 186 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 TEKT5Q96M29 485 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 NUDCD1Q96RS6 583 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 TMEM121Q9BTD3 319 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 TMEM121BQ9BXQ6 578 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 AP1M1Q9BXS5 423 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 SARDHQ9UL12 918 aa19.07■□□□□ 0.64
CCDC9-205ENST00000600117 FARP1Q9Y4F1 1045 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 SMG1Q96Q15 3661 aaKnown RBP19.07■□□□□ 0.64
CCDC9-205ENST00000600117 CFAP69A5D8W1 941 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 ALDH1A2O94788 518 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 CD68P34810 354 aaPredicted RBP19.06■□□□□ 0.64
CCDC9-205ENST00000600117 GDF10P55107 478 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 NIPAL4Q0D2K0 466 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 IHHQ14623 411 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 CST6Q15828 149 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 ARSIQ5FYB1 569 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 NCEH1Q6PIU2 408 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 RYBPQ8N488 228 aaPredicted RBP19.06■□□□□ 0.64
CCDC9-205ENST00000600117 TMIEQ8NEW7 156 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 ARRDC2Q8TBH0 407 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 RTP4Q96DX8 246 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 AGAP3Q96P47 875 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 VAT1Q99536 393 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 CPEB1Q9BZB8 566 aaKnown RBP19.06■□□□□ 0.64
CCDC9-205ENST00000600117 POLR1EQ9GZS1 481 aaKnown RBP19.06■□□□□ 0.64
CCDC9-205ENST00000600117 ZDHHC6Q9H6R6 413 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 HOMER3Q9NSC5 361 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 RNF14Q9UBS8 474 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 IL36AQ9UHA7 158 aa19.06■□□□□ 0.64
CCDC9-205ENST00000600117 DRG1Q9Y295 367 aaKnown RBP19.06■□□□□ 0.64
CCDC9-205ENST00000600117 LOC400499M0QZD8 3231 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 KRIT1O00522 736 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 ZBTB24O43167 697 aaPredicted RBP19.05■□□□□ 0.64
CCDC9-205ENST00000600117 LEFTY1O75610 366 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 ZNF189O75820 626 aaPredicted RBP19.05■□□□□ 0.64
CCDC9-205ENST00000600117 PRNPP04156 253 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 ITGAVP06756 1048 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 PSMD8P48556 350 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 SCNN1BP51168 640 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 METAP1P53582 386 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 AP1S1P61966 158 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 DSC2Q02487 901 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 FOXC1Q12948 553 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 RALGPS1Q5JS13 557 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 TCEAL6Q6IPX3 200 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 TTC27Q6P3X3 843 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 DSG4Q86SJ6 1040 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 CACUL1Q86Y37 369 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 FAM71DQ8N9W8 422 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 PIP4K2CQ8TBX8 421 aa19.05■□□□□ 0.64
CCDC9-205ENST00000600117 GRIN3AQ8TCU5 1115 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms