RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 PADI4Q9UM07 663 aa17.42■□□□□ 0.38
SMG9-210ENST00000600097 CCDC187A0A096LP49 1063 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 FAM170AA1A519 330 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 YY2O15391 372 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 MMEP08473 750 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 EIF4A3P38919 411 aaKnown RBP17.41■□□□□ 0.38
SMG9-210ENST00000600097 CDO1Q16878 200 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 FOXR1Q6PIV2 292 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 FSTL5Q8N475 847 aaPredicted RBP17.41■□□□□ 0.38
SMG9-210ENST00000600097 EPS8L1Q8TE68 723 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 CXorf40AQ8TE69 158 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 SCG3Q8WXD2 468 aaKnown RBP17.41■□□□□ 0.38
SMG9-210ENST00000600097 CASKIN2Q8WXE0 1202 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 VOPP1Q96AW1 172 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 TBC1D31Q96DN5 1066 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 CCDC3Q9BQI4 270 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 STK33Q9BYT3 514 aa17.41■□□□□ 0.38
SMG9-210ENST00000600097 B8ZZF3 427 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 F8VZ95 297 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 KDELR3O43731 214 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 MMP20O60882 483 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 LRIG2O94898 1065 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 TNFSF15O95150 251 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 ITGA2BP08514 1039 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 TSHRP16473 764 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 PTPN9P43378 593 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 PEX5P50542 639 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 SUOXP51687 545 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 UBE2HP62256 183 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 LY6DQ14210 128 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 ELOCQ15369 112 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 C15orf59Q2T9L4 293 aaPredicted RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 CCDC14Q49A88 953 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 ATXN7L2Q5T6C5 722 aaPredicted RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 LVRNQ6Q4G3 990 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 CCDC81Q6ZN84 652 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 SDR16C5Q8N3Y7 309 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 RXFP2Q8WXD0 754 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 COL26A1Q96A83 441 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 MED8Q96G25 268 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 LIN37Q96GY3 246 aaPredicted RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 EPAS1Q99814 870 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 SEMA4CQ9C0C4 833 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 TTYH3Q9C0H2 523 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 CLPBQ9H078 707 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 DKK3Q9UBP4 350 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 PNMA8BQ9ULN7 279 aaPredicted RBP17.4■□□□□ 0.38
SMG9-210ENST00000600097 DOLKQ9UPQ8 538 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 MFHAS1Q9Y4C4 1052 aa17.4■□□□□ 0.38
SMG9-210ENST00000600097 TMEM110-MUSTN1A8MSY1 372 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 FAM72CH0Y354 149 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 TMX2-CTNND1H3BSU7 103 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 NTN3O00634 580 aaPredicted RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 BUB1O43683 1085 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 TMCC1O94876 653 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 IGSF6O95976 241 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 PLEKP08567 350 aaPredicted RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 ALPIP09923 528 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 MMP8P22894 467 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 ERCC5P28715 1186 aaPredicted RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 PDX1P52945 283 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 EIF3IQ13347 325 aaKnown RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 KLHL40Q2TBA0 621 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 RAB6CQ53S08 254 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 INO80DQ53TQ3 878 aaPredicted RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 FAM72AQ5TYM5 149 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 FAM72DQ6L9T8 149 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 LEKR1Q6ZMV7 388 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 FAM72BQ86X60 149 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 ARL10Q8N8L6 244 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 TP53I13Q8NBR0 393 aaPredicted RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 RAB6CQ9H0N0 254 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 SYNDIG1Q9H7V2 258 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 MBNL1Q9NR56 388 aaKnown RBP17.39■□□□□ 0.37
SMG9-210ENST00000600097 NEU3Q9UQ49 428 aa17.39■□□□□ 0.37
SMG9-210ENST00000600097 RP1P56715 2156 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 C2CD4BA6NLJ0 364 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 CYP1A1P04798 512 aaPredicted RBP17.38■□□□□ 0.37
SMG9-210ENST00000600097 XPAP23025 273 aaPredicted RBP17.38■□□□□ 0.37
SMG9-210ENST00000600097 HK3P52790 923 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 RHOAP61586 193 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 ELP6Q0PNE2 266 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 CLN3Q13286 438 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 LRRC73Q5JTD7 316 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 ZNF354CQ86Y25 554 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 CENPIQ92674 756 aaPredicted RBP17.38■□□□□ 0.37
SMG9-210ENST00000600097 NTAN1Q96AB6 310 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 CCNL2Q96S94 520 aaPredicted RBP17.38■□□□□ 0.37
SMG9-210ENST00000600097 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG9-210ENST00000600097 GULP1Q9UBP9 304 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 DACH1Q9UI36 760 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 NOCTQ9UK39 431 aaKnown RBP17.38■□□□□ 0.37
SMG9-210ENST00000600097 PCDHGA7Q9Y5G6 932 aa17.38■□□□□ 0.37
SMG9-210ENST00000600097 COL27A1Q8IZC6 1860 aaPredicted RBP17.37■□□□□ 0.37
SMG9-210ENST00000600097 PMS2P1A4D2B8 440 aa17.37■□□□□ 0.37
SMG9-210ENST00000600097 PLD2O14939 933 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms