RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 ZNF670Q9BS34 389 aa28.48■■■□□ 2.15
ZNF558-206ENST00000599938 SLC17A9Q9BYT1 436 aa28.48■■■□□ 2.15
ZNF558-206ENST00000599938 PCOLCE2Q9UKZ9 415 aa28.48■■■□□ 2.15
ZNF558-206ENST00000599938 TPRP12270 2363 aaKnown RBP28.48■■■□□ 2.15
ZNF558-206ENST00000599938 CHD8Q9HCK8 2581 aa28.48■■■□□ 2.15
ZNF558-206ENST00000599938 AREL1O15033 823 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 PCDHGA12O60330 932 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 MTA2O94776 668 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 XPAP23025 273 aaPredicted RBP28.47■■■□□ 2.15
ZNF558-206ENST00000599938 ZNF235Q14590 738 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 LBRQ14739 615 aaKnown RBP28.47■■■□□ 2.15
ZNF558-206ENST00000599938 PDK2Q15119 407 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 SRLQ86TD4 932 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 GAS2L3Q86XJ1 694 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 OXR1Q8N573 874 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 TUBGCP5Q96RT8 1024 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 SUV39H2Q9H5I1 410 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 ATP13A3Q9H7F0 1226 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 INTUQ9ULD6 942 aa28.47■■■□□ 2.15
ZNF558-206ENST00000599938 SHROOM3Q8TF72 1996 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 ANKRD36A6QL64 1941 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 MFSD11O43934 449 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 CSNK1DP48730 415 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 ARRB1P49407 418 aaPredicted RBP28.46■■■□□ 2.15
ZNF558-206ENST00000599938 FGL2Q14314 439 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 TRIP6Q15654 476 aaKnown RBP28.46■■■□□ 2.15
ZNF558-206ENST00000599938 INAVAQ3KP66 663 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 SPATS2Q86XZ4 545 aaKnown RBP28.46■■■□□ 2.15
ZNF558-206ENST00000599938 MAP7D3Q8IWC1 876 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 KLHDC7BQ96G42 594 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 ZNF641Q96N77 438 aaPredicted RBP28.46■■■□□ 2.15
ZNF558-206ENST00000599938 PSKH2Q96QS6 385 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 BTBD3Q9Y2F9 522 aa28.46■■■□□ 2.15
ZNF558-206ENST00000599938 ACACBO00763 2458 aa28.45■■■□□ 2.15
ZNF558-206ENST00000599938 TSPAN11A1L157 253 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 IGLON5A6NGN9 336 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 MUSKO15146 869 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 YKT6O15498 198 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 MAFKO60675 156 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 CBFA2T3O75081 653 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 PAK4O96013 591 aaPredicted RBP28.45■■■□□ 2.14
ZNF558-206ENST00000599938 THEGLP0DJG4 465 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 TIMP2P16035 220 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 SERPINA4P29622 427 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 ARHGAP25P42331 645 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 GRK6P43250 576 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 CLDN2P57739 230 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 SLC10A7Q0GE19 358 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 FOXC1Q12948 553 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 SGCGQ13326 291 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 NCBP2-AS2Q69YL0 99 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 DBX2Q6ZNG2 339 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 GCNT7Q6ZNI0 430 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 CAMK1DQ8IU85 385 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 RHBDD1Q8TEB9 315 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 NSMCE1Q8WV22 266 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 ANP32EQ9BTT0 268 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 ERVMER34-1Q9H9K5 563 aa28.45■■■□□ 2.14
ZNF558-206ENST00000599938 BUB1BO60566 1050 aaPredicted RBP28.44■■■□□ 2.14
ZNF558-206ENST00000599938 RENBPP51606 427 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 ANKRD20A8PQ5CZ79 823 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 BRAT1Q6PJG6 821 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 PTAR1Q7Z6K3 402 aaPredicted RBP28.44■■■□□ 2.14
ZNF558-206ENST00000599938 ABI3BPQ7Z7G0 1075 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 PCDH19Q8TAB3 1148 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 HCAR2Q8TDS4 363 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 CXorf40AQ8TE69 158 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 ANGPTL2Q9UKU9 493 aa28.44■■■□□ 2.14
ZNF558-206ENST00000599938 A6NNZ2 444 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 RAD51BO15315 384 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 PEX11BO96011 259 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 EPHA8P29322 1005 aaPredicted RBP28.43■■■□□ 2.14
ZNF558-206ENST00000599938 SCNN1BP51168 640 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 SUOXP51687 545 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 AP1S1P61966 158 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 NSUN2Q08J23 767 aaKnown RBP eCLIP28.43■■■□□ 2.14
ZNF558-206ENST00000599938 ELP6Q0PNE2 266 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 SHBQ15464 509 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 GATAD2AQ86YP4 633 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 BBS5Q8N3I7 341 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 PAF1Q8N7H5 531 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 OR13H1Q8NG92 308 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 FAF2Q96CS3 445 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 WRAP53Q9BUR4 548 aaKnown RBP28.43■■■□□ 2.14
ZNF558-206ENST00000599938 C1QTNF2Q9BXJ5 285 aa28.43■■■□□ 2.14
ZNF558-206ENST00000599938 SPEGQ15772 3267 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 ITIH2P19823 946 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 HSPA9P38646 679 aaKnown RBP28.42■■■□□ 2.14
ZNF558-206ENST00000599938 MAGEA1P43355 309 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 BCL2L1Q07817 233 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 PAFAH1B3Q15102 231 aaKnown RBP28.42■■■□□ 2.14
ZNF558-206ENST00000599938 UGP2Q16851 508 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 KYAT3Q6YP21 454 aaKnown RBP28.42■■■□□ 2.14
ZNF558-206ENST00000599938 CCDC170Q8IYT3 715 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 DENND6BQ8NEG7 585 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 BAHD1Q8TBE0 780 aaPredicted RBP28.42■■■□□ 2.14
ZNF558-206ENST00000599938 RAPGEF5Q92565 580 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 CDC6Q99741 560 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 PCDH12Q9NPG4 1184 aa28.42■■■□□ 2.14
ZNF558-206ENST00000599938 LRRD1A4D1F6 860 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms