RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TSPAN6O43657 245 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 SERPINA4P29622 427 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 GARSP41250 739 aaKnown RBP28.5■■■□□ 2.15
SSBP4-206ENST00000599699 GALNT2Q10471 571 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 MARC1Q5VT66 337 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 ERMP1Q7Z2K6 904 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 KIAA1328Q86T90 577 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 CAMK1DQ8IU85 385 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 ZNF641Q96N77 438 aaPredicted RBP28.5■■■□□ 2.15
SSBP4-206ENST00000599699 IL21RQ9HBE5 538 aa28.5■■■□□ 2.15
SSBP4-206ENST00000599699 REXO2Q9Y3B8 237 aaKnown RBP28.5■■■□□ 2.15
SSBP4-206ENST00000599699 RCCD1A6NED2 376 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 PEX11BO96011 259 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 WNT1P04628 370 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 TIMP2P16035 220 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 HSPA9P38646 679 aaKnown RBP28.49■■■□□ 2.15
SSBP4-206ENST00000599699 MMP13P45452 471 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 GBE1Q04446 702 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 BCL2L1Q07817 233 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 PPM1JQ5JR12 505 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 DAAM2Q86T65 1068 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 ZNF830Q96NB3 372 aaPredicted RBP28.49■■■□□ 2.15
SSBP4-206ENST00000599699 GGT7Q9UJ14 662 aa28.49■■■□□ 2.15
SSBP4-206ENST00000599699 C3orf70A6NLC5 250 aaPredicted RBP28.48■■■□□ 2.15
SSBP4-206ENST00000599699 ZNF487B1APH4 448 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 KCNK3O14649 394 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 PSTPIP1O43586 416 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 GJB3O75712 270 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 MX2P20592 715 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 AKT2P31751 481 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 AP1S1P61966 158 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 SGCGQ13326 291 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 IFI16Q16666 785 aaKnown RBP28.48■■■□□ 2.15
SSBP4-206ENST00000599699 TMEM259Q4ZIN3 620 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 C11orf63Q6NUN7 778 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 RFX6Q8HWS3 928 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 TMEM139Q8IV31 216 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 HCAR2Q8TDS4 363 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 SLC17A9Q9BYT1 436 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 FZD3Q9NPG1 666 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 CA5BQ9Y2D0 317 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 PLXNA2O75051 1894 aa28.48■■■□□ 2.15
SSBP4-206ENST00000599699 A0A1W2PR77 199 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 TTC24A2A3L6 582 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-206ENST00000599699 IGLON5A6NGN9 336 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 APOL1O14791 398 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 HNRNPA2B1P22626 353 aaKnown RBP28.47■■■□□ 2.15
SSBP4-206ENST00000599699 CTSKP43235 329 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 VAV2P52735 878 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 TIGD7Q6NT04 549 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-206ENST00000599699 BRAT1Q6PJG6 821 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 VSIG1Q86XK7 387 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 MFSD2AQ8NA29 543 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 CCNYQ8ND76 341 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 TPCN2Q8NHX9 752 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 CALR3Q96L12 384 aaKnown RBP28.47■■■□□ 2.15
SSBP4-206ENST00000599699 NT5MQ9NPB1 228 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 SCUBE2Q9NQ36 999 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 SALL4Q9UJQ4 1053 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 FNDC3AQ9Y2H6 1198 aaKnown RBP28.47■■■□□ 2.15
SSBP4-206ENST00000599699 HEY1Q9Y5J3 304 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 DUSP10Q9Y6W6 482 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 DNAH14Q0VDD8 3507 aa28.47■■■□□ 2.15
SSBP4-206ENST00000599699 TLR4O00206 839 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 AREL1O15033 823 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 NEBLO76041 1014 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 ITIH2P19823 946 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 NOVA1P51513 510 aaKnown RBP28.46■■■□□ 2.15
SSBP4-206ENST00000599699 GSDMDP57764 484 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 SLC14A1Q13336 389 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 ZSCAN30Q86W11 494 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 CXorf40AQ8TE69 158 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 SLC32A1Q9H598 525 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 GDF3Q9NR23 364 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 TM7SF3Q9NS93 570 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 DTLQ9NZJ0 730 aa28.46■■■□□ 2.15
SSBP4-206ENST00000599699 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.46■■■□□ 2.15
SSBP4-206ENST00000599699 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-206ENST00000599699 UPK3BL1B0FP48 263 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 UPK3BL2E5RIL1 263 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 SPINT1O43278 529 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 KCNK5O95279 499 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 PAK4O96013 591 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-206ENST00000599699 ZFXP17010 805 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-206ENST00000599699 SUOXP51687 545 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 MAXP61244 160 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 DYNLT1P63172 113 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 ITKQ08881 620 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 SLC10A2Q12908 348 aaPredicted RBP28.45■■■□□ 2.14
SSBP4-206ENST00000599699 UGP2Q16851 508 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 PSAPL1Q6NUJ1 521 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 ERAP2Q6P179 960 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 MFSD7Q6UXD7 560 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 TXLNBQ8N3L3 684 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 PGBD5Q8N414 524 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 PLD5Q8N7P1 536 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 DEFB124Q8NES8 71 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 LRRN4Q8WUT4 740 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 NUDCD1Q96RS6 583 aa28.45■■■□□ 2.14
SSBP4-206ENST00000599699 MGME1Q9BQP7 344 aa28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms