RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
PNKP-213ENST00000599543 SEMG2Q02383 582 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 RAD51Q06609 339 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 PDE1CQ14123 709 aaPredicted RBP18.99■□□□□ 0.63
PNKP-213ENST00000599543 FZD2Q14332 565 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 DCUN1D2Q6PH85 259 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 LENG8Q96PV6 779 aaPredicted RBP18.99■□□□□ 0.63
PNKP-213ENST00000599543 CNPY3Q9BT09 278 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 DUSP23Q9BVJ7 150 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 CATSPERBQ9H7T0 1116 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 EVA1BQ9NVM1 165 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 TCRBV5S1A1TA0A578 114 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 SCAMP1O15126 338 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 CSF2P04141 144 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 NME1P15531 152 aaKnown RBP18.98■□□□□ 0.63
PNKP-213ENST00000599543 ZNF75DP51815 510 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 RHOAP61586 193 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 RPL7AP62424 266 aaKnown RBP18.98■□□□□ 0.63
PNKP-213ENST00000599543 PARP15Q460N3 678 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 ACAD10Q6JQN1 1059 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 GDPD4Q6W3E5 623 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 CACTIN-AS1Q8N1I8 211 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 DCBLD1Q8N8Z6 715 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 DENND6BQ8NEG7 585 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 ZNF548Q8NEK5 533 aaPredicted RBP18.98■□□□□ 0.63
PNKP-213ENST00000599543 HMCESQ96FZ2 354 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 APOLD1Q96LR9 279 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 KLF6Q99612 283 aaPredicted RBP18.98■□□□□ 0.63
PNKP-213ENST00000599543 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.98■□□□□ 0.63
PNKP-213ENST00000599543 NOL6Q9H6R4 1146 aaKnown RBP18.98■□□□□ 0.63
PNKP-213ENST00000599543 CAAP1Q9H8G2 361 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 FZD10Q9ULW2 581 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 LRRK1Q38SD2 2015 aa18.98■□□□□ 0.63
PNKP-213ENST00000599543 ASXL3Q9C0F0 2248 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 RASA4BC9J798 803 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 FGF10O15520 208 aaPredicted RBP18.97■□□□□ 0.63
PNKP-213ENST00000599543 RASA4O43374 803 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 NEBLO76041 1014 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 GIMD1P0DJR0 217 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 ABCG1P45844 678 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 YBEYP58557 167 aaPredicted RBP18.97■□□□□ 0.63
PNKP-213ENST00000599543 RTP5Q14D33 572 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 INO80DQ53TQ3 878 aaPredicted RBP18.97■□□□□ 0.63
PNKP-213ENST00000599543 LRRC73Q5JTD7 316 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 KDM7AQ6ZMT4 941 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 TTC7BQ86TV6 843 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 MCOLN2Q8IZK6 566 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 CXorf40AQ8TE69 158 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 ASB12Q8WXK4 309 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 NCAPGQ9BPX3 1015 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 USP29Q9HBJ7 922 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 ANKRD36A6QL64 1941 aa18.97■□□□□ 0.63
PNKP-213ENST00000599543 K7ESM1 405 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 AREL1O15033 823 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 SPINT1O43278 529 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 MT-CO3P00414 261 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 SERPING1P05155 500 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 DUSP3P51452 185 aaPredicted RBP18.96■□□□□ 0.63
PNKP-213ENST00000599543 THOP1P52888 689 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 TPI1P60174 286 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 SERINC3Q13530 473 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 PPP1R15BQ5SWA1 713 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 PPP1R2P3Q6NXS1 205 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 VOPP1Q96AW1 172 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 C1QTNF7Q9BXJ2 289 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 KLC2Q9H0B6 622 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 DONSONQ9NYP3 566 aa18.96■□□□□ 0.63
PNKP-213ENST00000599543 PTPRQQ9UMZ3 2332 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 WASH4PA8MWX3 477 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 MFAP3LO75121 409 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 TM7SF2O76062 418 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 GP1BAP07359 652 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 JUNDP17535 347 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 XPAP23025 273 aaPredicted RBP18.95■□□□□ 0.62
PNKP-213ENST00000599543 HTR7P34969 479 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 EIF4A3P38919 411 aaKnown RBP18.95■□□□□ 0.62
PNKP-213ENST00000599543 PFN3P60673 137 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 COL9A2Q14055 689 aaPredicted RBP18.95■□□□□ 0.62
PNKP-213ENST00000599543 PTK2BQ14289 1009 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 ZCCHC8Q6NZY4 707 aaKnown RBP18.95■□□□□ 0.62
PNKP-213ENST00000599543 LRRC69Q6ZNQ3 347 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 VPS36Q86VN1 386 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 UMODL1-AS1Q8N2C9 162 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 FAM181AQ8N9Y4 354 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 NETO2Q8NC67 525 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 SYN2Q92777 582 aaPredicted RBP18.95■□□□□ 0.62
PNKP-213ENST00000599543 IQCDQ96DY2 449 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 EXOC2Q96KP1 924 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 NCKIPSDQ9NZQ3 722 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 DKK3Q9UBP4 350 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 MFHAS1Q9Y4C4 1052 aa18.95■□□□□ 0.62
PNKP-213ENST00000599543 BPTFQ12830 3046 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 A0A087X0T9 212 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 RRP8O43159 456 aaKnown RBP18.94■□□□□ 0.62
PNKP-213ENST00000599543 AQP9O43315 295 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 OPA1O60313 960 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 BRINP1O60477 761 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 MMP20O60882 483 aa18.94■□□□□ 0.62
PNKP-213ENST00000599543 FTLP02792 175 aaPredicted RBP18.94■□□□□ 0.62
PNKP-213ENST00000599543 FAM228BP0C875 321 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms