RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 COL9A2Q14055 689 aaPredicted RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 PDE1CQ14123 709 aaPredicted RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 CYP4V2Q6ZWL3 525 aaPredicted RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 DCP2Q8IU60 420 aaKnown RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 FAM174AQ8TBP5 190 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 CASKIN2Q8WXE0 1202 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 ASB12Q8WXK4 309 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 SLC39A8Q9C0K1 460 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 DHX35Q9H5Z1 703 aaKnown RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 MBNL1Q9NR56 388 aaKnown RBP23.18■■□□□ 1.3
CCDC61-207ENST00000599044 AIPL1Q9NZN9 384 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 AP4E1Q9UPM8 1137 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 U3KQA8 63 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 TRPM6Q9BX84 2022 aa23.18■■□□□ 1.3
CCDC61-207ENST00000599044 ASXL3Q9C0F0 2248 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 TDRD6O60522 2096 aaKnown RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 IGSF6O95976 241 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 FTLP02792 175 aaPredicted RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 CSF2P04141 144 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 SKILP12757 684 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 RABIFP47224 123 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 TPI1P60174 286 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 EIF2B5Q13144 721 aaKnown RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 RFFLQ8WZ73 363 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 APOLD1Q96LR9 279 aa23.17■■□□□ 1.3
CCDC61-207ENST00000599044 KCTD15Q96SI1 283 aaPredicted RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 WRAP53Q9BUR4 548 aaKnown RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 SNRNP25Q9BV90 132 aaKnown RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 SMG1Q96Q15 3661 aaKnown RBP23.17■■□□□ 1.3
CCDC61-207ENST00000599044 A0A1B0GTH6 734 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 K7ESM1 405 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 SCAMP1O15126 338 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 FGF10O15520 208 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 BUB1BO60566 1050 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 CKMT1AP12532 417 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 NME1P15531 152 aaKnown RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 IGFALSP35858 605 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 PAPOLAP51003 745 aaKnown RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 DAB2P98082 770 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 VPS36Q86VN1 386 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 PARGQ86W56 976 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 ZNF548Q8NEK5 533 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 TCEAL2Q9H3H9 227 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 NLGN3Q9NZ94 848 aa23.16■■□□□ 1.3
CCDC61-207ENST00000599044 UBA2Q9UBT2 640 aaPredicted RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 IPO11Q9UI26 975 aaKnown RBP23.16■■□□□ 1.3
CCDC61-207ENST00000599044 A0A1W2PQC6 194 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 PRAMEF11O60813 436 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 MIPP30301 263 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 PRKCIP41743 596 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 RGRP47804 291 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 HNRNPKP61978 463 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC61-207ENST00000599044 RAD51Q06609 339 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 NR1I3Q14994 352 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 ERMARDQ5T6L9 678 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 ZSCAN30Q86W11 494 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 ARHGAP12Q8IWW6 846 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 TP53INP2Q8IXH6 220 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 CRELD1Q96HD1 420 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 CPEB1Q9BZB8 566 aaKnown RBP23.15■■□□□ 1.3
CCDC61-207ENST00000599044 DKK3Q9UBP4 350 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 CNOT8Q9UFF9 292 aaKnown RBP23.15■■□□□ 1.3
CCDC61-207ENST00000599044 CLCA2Q9UQC9 943 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 COQ6Q9Y2Z9 468 aa23.15■■□□□ 1.3
CCDC61-207ENST00000599044 EEF2KO00418 725 aaKnown RBP23.14■■□□□ 1.29
CCDC61-207ENST00000599044 NDST2P52849 883 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 SEMG2Q02383 582 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 FILIP1LQ4L180 1135 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 AFMIDQ63HM1 303 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 ARHGAP36Q6ZRI8 547 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 ZSWIM9Q86XI8 627 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 GAS2L3Q86XJ1 694 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 RBFAQ8N0V3 343 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 NPWQ8N729 165 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 DCBLD1Q8N8Z6 715 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 TP53I13Q8NBR0 393 aaPredicted RBP23.14■■□□□ 1.29
CCDC61-207ENST00000599044 RNF214Q8ND24 703 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 DENND6BQ8NEG7 585 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 ARHGEF26Q96DR7 871 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 SHROOM3Q8TF72 1996 aa23.14■■□□□ 1.29
CCDC61-207ENST00000599044 TLX3O43711 291 aaPredicted RBP23.13■■□□□ 1.29
CCDC61-207ENST00000599044 TM7SF2O76062 418 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 MT-CO3P00414 261 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 PRKCGP05129 697 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 GZMAP12544 262 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 JUNDP17535 347 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 ERCC2P18074 760 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 HTR7P34969 479 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 KLHL30Q0D2K2 578 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 RTP5Q14D33 572 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 TMEM52BQ4KMG9 183 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 HS1BP3Q53T59 392 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 RFX8Q6ZV50 586 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 NYAP1Q6ZVC0 841 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 PDZD3Q86UT5 571 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 CAMK1DQ8IU85 385 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 FAM181AQ8N9Y4 354 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 TSEN2Q8NCE0 465 aaKnown RBP23.13■■□□□ 1.29
CCDC61-207ENST00000599044 CXorf40AQ8TE69 158 aa23.13■■□□□ 1.29
CCDC61-207ENST00000599044 NXPE2Q96DL1 559 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms