RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PAPOLAP51003 745 aaKnown RBP13.94□□□□□ -0.18
SCAF1-203ENST00000598359 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
SCAF1-203ENST00000598359 OVGP1Q12889 678 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 KIAA1161Q6NSJ0 714 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 Q6ZSR6 202 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 RFX8Q6ZV50 586 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 ABI3BPQ7Z7G0 1075 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 TTC7BQ86TV6 843 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 OXR1Q8N573 874 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 NPWQ8N729 165 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 ISCUQ9H1K1 167 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 UBA2Q9UBT2 640 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-203ENST00000598359 SCINQ9Y6U3 715 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 A0A1W2PQJ5 194 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 DFFAO00273 331 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 TRIM38O00635 465 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 MMP20O60882 483 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 ZIC2O95409 532 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 ERCC2P18074 760 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 RGRP47804 291 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 GSDMDP57764 484 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 SEMG2Q02383 582 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 INO80DQ53TQ3 878 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 TPRG1LQ5T0D9 272 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 TXNRD3NBQ6F5E7 133 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 TMPRSS7Q7RTY8 843 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 ARHGAP12Q8IWW6 846 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 SLC25A45Q8N413 288 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 KIAA1524Q8TCG1 905 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 ARHGEF26Q96DR7 871 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 LRIG1Q96JA1 1093 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 KLF6Q99612 283 aaPredicted RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 WRAP53Q9BUR4 548 aaKnown RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 C1QTNF2Q9BXJ5 285 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 OSBPL1AQ9BXW6 950 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 XPO4Q9C0E2 1151 aaKnown RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 THAP2Q9H0W7 228 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 CWC15Q9P013 229 aaKnown RBP13.93□□□□□ -0.18
SCAF1-203ENST00000598359 PLXNB3Q9ULL4 1909 aa13.93□□□□□ -0.18
SCAF1-203ENST00000598359 PTPRBP23467 1997 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 A0A087X0T9 212 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 A6NNZ2 444 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 AREL1O15033 823 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 FFAR2O15552 330 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 TSPAN6O43657 245 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 BUB1BO60566 1050 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-203ENST00000598359 GYPCP04921 128 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 PRKCGP05129 697 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 SERPING1P05155 500 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 FAM228BP0C875 321 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 MYBL1P10243 752 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 MYF5P13349 255 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 TIMP2P16035 220 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 DGKAP23743 735 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 HTR7P34969 479 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 ACADVLP49748 655 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 NDST2P52849 883 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 ZBED6P86452 979 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 RAD51Q06609 339 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 SGCGQ13326 291 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 SOWAHCQ53LP3 525 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-203ENST00000598359 MDM1Q8TC05 714 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 FNIP1Q8TF40 1166 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 CASKIN2Q8WXE0 1202 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 HSPH1Q92598 858 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 RAB7BQ96AH8 199 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 TRIM11Q96F44 468 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 NCAPGQ9BPX3 1015 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 SPTLC3Q9NUV7 552 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 KLHL11Q9NVR0 708 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 DNAJC28Q9NX36 388 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 CAPN11Q9UMQ6 739 aa13.92□□□□□ -0.18
SCAF1-203ENST00000598359 COL5A1P20908 1838 aaPredicted RBP13.92□□□□□ -0.18
SCAF1-203ENST00000598359 TTC24A2A3L6 582 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 ARHGAP42A6NI28 874 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 SIGLEC6O43699 453 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 CAPNS1P04632 268 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 CASP14P31944 242 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 DPYSQ14117 519 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 FZD2Q14332 565 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 SMAD1Q15797 465 aaKnown RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 AFMIDQ63HM1 303 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 VPS36Q86VN1 386 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 CAMK1DQ8IU85 385 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 TSEN2Q8NCE0 465 aaKnown RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 TSC1Q92574 1164 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAF1-203ENST00000598359 COQ6Q9Y2Z9 468 aa13.91□□□□□ -0.18
SCAF1-203ENST00000598359 LUC7L2Q9Y383 392 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms