RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 NRG2O14511 850 aaPredicted RBP17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KCNA4P22459 653 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 ALDH3A1P30838 453 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 SLC1A2P43004 574 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CSRP3P50461 194 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 OXCT1P55809 520 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 OCRLQ01968 901 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 PCLAFQ15004 111 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 TSTD2Q5T7W7 516 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 GAREM2Q75VX8 874 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 CLEC14AQ86T13 490 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 TRIM42Q8IWZ5 723 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 OR13J1Q8NGT2 312 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 RANBP9Q96S59 729 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 PRKD2Q9BZL6 878 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 MYLK2Q9H1R3 596 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 STOML2Q9UJZ1 356 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 TBC1D30Q9Y2I9 924 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 KCTD3Q9Y597 815 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 NUMBLQ9Y6R0 609 aa17.2■□□□□ 0.34
SHKBP1-216ENST00000598201 SIN3BO75182 1162 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 GSTA1P08263 222 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CTNNB1P35222 781 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ERVK-21P61565 698 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CYP4F8P98187 520 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 BNIP1Q12981 228 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 MBLAC2Q68D91 279 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ALG1LQ6GMV1 187 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 NLRP9Q7RTR0 991 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ITIH5Q86UX2 942 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 GPR65Q8IYL9 337 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 HS6ST3Q8IZP7 471 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CNPY4Q8N129 248 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PNPLA1Q8N8W4 532 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 SAMD11Q96NU1 681 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ACE2Q9BYF1 805 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 TRIM55Q9BYV6 548 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 UBA2Q9UBT2 640 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PLXNA4Q9HCM2 1894 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 A0A0G2JND7 137 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 MROH6A6NGR9 719 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CCL22O00626 93 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 AURKAO14965 403 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 SNNO75324 88 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CSPG5O95196 566 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 TGDSO95455 350 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 OLFM2O95897 454 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 MPOP05164 745 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 DLDP09622 509 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PAMP19021 973 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 HDCP19113 662 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 SAT1P21673 171 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 GABRR2P28476 465 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CDK18Q07002 472 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 THOC5Q13769 683 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 FSCBQ5H9T9 825 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 RNF219Q5W0B1 726 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF470Q6ECI4 717 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 NEPROQ6NW34 567 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 SETD3Q86TU7 594 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 C2CD4AQ8NCU7 369 aaPredicted RBP17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PPM1EQ8WY54 764 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 ERP27Q96DN0 273 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 EXOC2Q96KP1 924 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 C7orf26Q96N11 449 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 PSKH2Q96QS6 385 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CERS4Q9HA82 394 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 NOD2Q9HC29 1040 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 SEPT3Q9UH03 358 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 MAFFQ9ULX9 164 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CPQQ9Y646 472 aa17.19■□□□□ 0.34
SHKBP1-216ENST00000598201 CHD9Q3L8U1 2897 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 CBX4O00257 560 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 PHGDHO43175 533 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 CXCL14O95715 111 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 ARSDP51689 593 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 CCDC15Q0P6D6 951 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 GALNT3Q14435 633 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 CYTH1Q15438 398 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 RNF135Q8IUD6 432 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 SLC41A1Q8IVJ1 513 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 C10orf107Q8IVU9 208 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 GBP7Q8N8V2 638 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 TTC16Q8NEE8 873 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 RAB3IL1Q8TBN0 382 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 ZNF398Q8TD17 642 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 FEM1CQ96JP0 617 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 LRRC3Q9BY71 257 aa17.18■□□□□ 0.34
SHKBP1-216ENST00000598201 C2orf71A6NGG8 1288 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 C5orf67F2Z3F1 127 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 SOX1O00570 391 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 LDB2O43679 373 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 TBL1XO60907 577 aa17.17■□□□□ 0.34
SHKBP1-216ENST00000598201 HAUS5O94927 633 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms