RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 DHCR24Q15392 516 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 PDPK2PQ6A1A2 396 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 NLRP9Q7RTR0 991 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 E2F7Q96AV8 911 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 MTBPQ96DY7 904 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 THG1LQ9NWX6 298 aaKnown RBP23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 CDH7Q9ULB5 785 aa23.21■■□□□ 1.31
SPTBN4-210ENST00000596900 NFATC1O95644 943 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 NMBRP28336 390 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 ADAM15Q13444 863 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 CHRDL2Q6WN34 429 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 KCNMB4Q86W47 210 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 AHI1Q8N157 1196 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 ADGRE3Q9BY15 652 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 TRABDQ9H4I3 376 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 C20orf96Q9NUD7 363 aaPredicted RBP23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 NSMCE4AQ9NXX6 385 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 PSD3Q9NYI0 1048 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 ANKRD36A6QL64 1941 aa23.2■■□□□ 1.3
SPTBN4-210ENST00000596900 MT-CO1P00395 513 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 SNRPAP09012 282 aaKnown RBP23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 ADH5P11766 374 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 EML3Q32P44 896 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 FUT11Q495W5 492 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 NCEH1Q6PIU2 408 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 RNF135Q8IUD6 432 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 UNC5BQ8IZJ1 945 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 GABPB2Q8TAK5 448 aaPredicted RBP23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 LRRC3BQ96PB8 259 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 TRIB3Q96RU7 358 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 HS3ST2Q9Y278 367 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 HOXC11O43248 304 aaPredicted RBP23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 PAPSS2O95340 614 aaPredicted RBP23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 IGSF6O95976 241 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 CYP17A1P05093 508 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 ERVK-10P10266 1014 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 CSNK1DP48730 415 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 SRLQ86TD4 932 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 ATP2A3Q93084 1043 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 RMDN1Q96DB5 314 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 RSPRY1Q96DX4 576 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 CPNE1Q99829 537 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 ZFP14Q9HCL3 533 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 RAI2Q9Y5P3 530 aa23.19■■□□□ 1.3
SPTBN4-210ENST00000596900 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 HEPACAM2A8MVW5 462 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 MDH1P40925 334 aaKnown RBP23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 GALNT3Q14435 633 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 PEX13Q92968 403 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 ISG20Q96AZ6 181 aaKnown RBP23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 ALKBH8Q96BT7 664 aaKnown RBP23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 ZNF778Q96MU6 729 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 TM6SF2Q9BZW4 377 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 KCNK9Q9NPC2 374 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 SMG5Q9UPR3 1016 aaKnown RBP23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 CHKBQ9Y259 395 aa23.18■■□□□ 1.3
SPTBN4-210ENST00000596900 K7ERQ8 282 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 MT-ND3P03897 115 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 GP5P40197 560 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 KIAA0930Q6ICG6 404 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 MZB1Q8WU39 189 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 RIPOR3Q96MK2 946 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 CEP44Q9C0F1 390 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 SSU72Q9NP77 194 aaKnown RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 TREX1Q9NSU2 369 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 TMEM120BA0PK00 339 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 SRCP12931 536 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 SNRPD1P62314 119 aaKnown RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 ECT2LQ008S8 904 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 MSLNQ13421 630 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 PDGFRLQ15198 375 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 HSP90AA5PQ58FG0 334 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 TSTD2Q5T7W7 516 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 ASTLQ6HA08 431 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 PACS1Q6VY07 963 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 KIAA0907Q7Z7F0 614 aaPredicted RBP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 BRSK1Q8TDC3 778 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 PRO3102Q9H379 93 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 CDH22Q9UJ99 828 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 PCDHGC4Q9Y5F7 938 aa23.17■■□□□ 1.3
SPTBN4-210ENST00000596900 CCDC78A2IDD5 438 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 SMAD6O43541 496 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 FAM155BO75949 473 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 KRT4P19013 534 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 POLR2EP19388 210 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 DGKGP49619 791 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 TERF2Q15554 542 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 ATXN7L2Q5T6C5 722 aaPredicted RBP23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 TEDDM1Q5T9Z0 273 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 TRIM68Q6AZZ1 485 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 ESRP1Q6NXG1 681 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 NAT16Q8N8M0 369 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 OR2AP1Q8NGE2 309 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 BLOC1S5Q8TDH9 187 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 WFIKKN2Q8TEU8 576 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 RPL10LQ96L21 214 aaKnown RBP23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 NKIRAS1Q9NYS0 192 aa23.16■■□□□ 1.3
SPTBN4-210ENST00000596900 IL1RAPL1Q9NZN1 696 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms