RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 HP1BP3Q5SSJ5 553 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 ARMC3Q5W041 872 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 ALS2CLQ60I27 953 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 STEAP4Q687X5 459 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SFTPA1Q8IWL2 248 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 PYROXD1Q8WU10 500 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 FSD1LQ9BXM9 530 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 CIPCQ9C0C6 399 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 TNKS2Q9H2K2 1166 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 SYBUQ9NX95 663 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 RAI2Q9Y5P3 530 aa14.89□□□□□ -0.03
SHKBP1-211ENST00000595945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 TTC34A8MYJ7 566 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 LOC730098B7Z3J9 87 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 TRAFD1O14545 582 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 HTRA2O43464 458 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 NDST3O95803 873 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CPP00450 1065 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 APODP05090 189 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 FGF1P05230 155 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 GSTA2P09210 222 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 IL9P15248 144 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 HLA-DPA1P20036 260 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 SLC29A2Q14542 456 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 MYLK3Q32MK0 819 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 SIRPB2Q5JXA9 342 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CERCAMQ5T4B2 595 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CFAP58Q5T655 872 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 LRIG3Q6UXM1 1119 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CCNJLQ8IV13 435 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 DNAAF3Q8N9W5 541 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 CPEB1Q9BZB8 566 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 IL22Q9GZX6 179 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 THAP10Q9P2Z0 257 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 PLAAQ9Y263 795 aa14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 ARIH1Q9Y4X5 557 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-211ENST00000595945 SPECC1L-ADORA2AF8WAN1 911 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 SPAG6O75602 509 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 ACSL3O95573 720 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 POP4O95707 220 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 TPH1P17752 444 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 PGAM1P18669 254 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 CTHP32929 405 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 NNMTP40261 264 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 GALK1P51570 392 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 CCNHP51946 323 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 CRADDP78560 199 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 DENND2CQ68D51 928 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 TXNDC11Q6PKC3 985 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 UNC5AQ6ZN44 842 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 DPY19L3Q6ZPD9 716 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 Q6ZVU0 165 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 KDELC2Q7Z4H8 507 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 SLC25A41Q8N5S1 370 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 OR2A12Q8NGT7 310 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 UCMAQ8WVF2 138 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 IFT43Q96FT9 208 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 ZIM3Q96PE6 472 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 TUBGCP5Q96RT8 1024 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 RANBP9Q96S59 729 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 P2RY13Q9BPV8 354 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 NAT9Q9BTE0 207 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 KIFC1Q9BW19 673 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 C8orf33Q9H7E9 229 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 MRM3Q9HC36 420 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 FBRSL1Q9HCM7 1045 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 HECAQ9UBI9 543 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 ZC3H7BQ9UGR2 993 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 SOX13Q9UN79 622 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 CHKBQ9Y259 395 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 STARD13Q9Y3M8 1113 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 PCDHGC4Q9Y5F7 938 aa14.87□□□□□ -0.03
SHKBP1-211ENST00000595945 FAM237BA0A1B0GVD1 139 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 MAGEB16A2A368 324 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TBC1D3BA6NDS4 549 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SOCS5O75159 536 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PGLSO95336 258 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 C1QAP02745 245 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SHBGP04278 402 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ASGR2P07307 311 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PDHA1P08559 390 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ALADP13716 330 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 HNRNPLP14866 589 aaKnown RBP eCLIP14.86□□□□□ -0.031e-11■■■■□ 20.2
SHKBP1-211ENST00000595945 CA4P22748 312 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SSTR1P30872 391 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TNFRSF4P43489 277 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 RPL26P61254 145 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ST8SIA6P61647 398 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TFF2Q03403 129 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 BCL2L1Q07817 233 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ENPP2Q13822 863 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 FRG1Q14331 258 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ZNF234Q14588 700 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ACCSLQ4AC99 568 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms