RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 KCNK3O14649 394 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 MTSS1O43312 755 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 GFRA3O60609 400 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 FSBPO95073 299 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 HLA-DQB2P05538 268 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ADRB3P13945 408 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 TIMP2P16035 220 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 CES1P23141 567 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ITPKAP23677 461 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ATP5OP48047 213 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 TAS2R38P59533 333 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 OTUD4Q01804 1114 aaKnown RBP14.51□□□□□ -0.09
LIG1-208ENST00000595758 ZBTB17Q13105 803 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 NOMO1Q15155 1222 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ZNF569Q5MCW4 686 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 WDR45BQ5MNZ6 344 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 CFAP58Q5T655 872 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 KIAA0895LQ68EN5 471 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 TTC7BQ86TV6 843 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 PAF1Q8N7H5 531 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 TTC13Q8NBP0 860 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 PIGKQ92643 395 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 RAB7BQ96AH8 199 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 NSMCE3Q96MG7 304 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 QKIQ96PU8 341 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIG1-208ENST00000595758 HINFPQ9BQA5 517 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 CARD9Q9H257 536 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ARRDC1-AS1Q9H2J1 176 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 PREBQ9HCU5 417 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ATP8A1Q9Y2Q0 1164 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.51□□□□□ -0.09
LIG1-208ENST00000595758 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
LIG1-208ENST00000595758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIG1-208ENST00000595758 VPS13AQ96RL7 3174 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 PIEZO1Q92508 2521 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 WDR87Q6ZQQ6 2873 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 USP27XA6NNY8 438 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 XPAP23025 273 aaPredicted RBP14.5□□□□□ -0.09
LIG1-208ENST00000595758 MSNP26038 577 aaKnown RBP14.5□□□□□ -0.09
LIG1-208ENST00000595758 DPP6P42658 865 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 CCR5P51681 352 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 EIF3EP60228 445 aaKnown RBP14.5□□□□□ -0.09
LIG1-208ENST00000595758 DSC2Q02487 901 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 KLF1Q13351 362 aaPredicted RBP14.5□□□□□ -0.09
LIG1-208ENST00000595758 SLC45A4Q5BKX6 768 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 ALG1LQ6GMV1 187 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 BRAT1Q6PJG6 821 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 SYT12Q8IV01 421 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIG1-208ENST00000595758 CNTD1Q8N815 330 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 DNASE2BQ8WZ79 361 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 SNX19Q92543 992 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 BIRC7Q96CA5 298 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 AGAP3Q96P47 875 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 FAM118BQ9BPY3 351 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 CEP41Q9BYV8 373 aa14.5□□□□□ -0.09
LIG1-208ENST00000595758 TCRBV7S2A1N4TA0A589 114 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 TSPAN11A1L157 253 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 NEMP1O14524 444 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 AP1G1O43747 822 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 RNGTTO60942 597 aaKnown RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 SOCS5O75159 536 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 PCDH8O95206 1070 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 IGHV4-34P06331 123 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 RBP3P10745 1247 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 PTPN3P26045 913 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 MAOBP27338 520 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 MPLP40238 635 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 ABL2P42684 1182 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 SUOXP51687 545 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 NIPAL4Q0D2K0 466 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 WASHC5Q12768 1159 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 TEX44Q53QW1 395 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 NEK5Q6P3R8 708 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 DARS2Q6PI48 645 aaKnown RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 SLC13A5Q86YT5 568 aaPredicted RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 CDKL3Q8IVW4 592 aaPredicted RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 SLC35F6Q8N357 371 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 DCLK2Q8N568 766 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 ARRDC2Q8TBH0 407 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 HTR3CQ8WXA8 447 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 ECHDC3Q96DC8 303 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 FERMT1Q9BQL6 677 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 MIR1-1HGQ9H1L0 117 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 TMEM74BQ9NUR3 256 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 PILRBQ9UKJ0 227 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 TPX2Q9ULW0 747 aaKnown RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 PCDHGC4Q9Y5F7 938 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 FADS3Q9Y5Q0 445 aa14.49□□□□□ -0.09
LIG1-208ENST00000595758 PTPRZ1P23471 2315 aaPredicted RBP14.49□□□□□ -0.09
LIG1-208ENST00000595758 FAM186AA6NE01 2351 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 A0A1W2PQ67 120 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 A0A1W2PQU0 124 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 UPK3BL1B0FP48 263 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 C10orf142B7Z368 130 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 UPK3BL2E5RIL1 263 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 TRAFD1O14545 582 aaPredicted RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 ENC1O14682 589 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 AREL1O15033 823 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms