RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 FTH1P19P0C7X4 201 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 SERPINA4P29622 427 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 GKP32189 559 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 ABL2P42684 1182 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 AP1S1P61966 158 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 NSUN2Q08J23 767 aaKnown RBP eCLIP17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 SEL1L3Q68CR1 1132 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 TTC7BQ86TV6 843 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 MAP7D3Q8IWC1 876 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 SAP25Q8TEE9 199 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 IFT43Q96FT9 208 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 LENG8Q96PV6 779 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 C1QTNF2Q9BXJ5 285 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 ATP13A3Q9H7F0 1226 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 PCDH18Q9HCL0 1135 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 HAUS2Q9NVX0 235 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 FTSJ1Q9UET6 329 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 ZFR2Q9UPR6 939 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 CACNA1GO43497 2377 aa17.95■□□□□ 0.46
SHKBP1-204ENST00000594862 A0A1W2PQ67 120 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 AKR1B15C9JRZ8 316 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 KCNK3O14649 394 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 FPGTO14772 594 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 CDH6P55285 790 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 FAM193AP78312 1265 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 PDK2Q15119 407 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 ERAP2Q6P179 960 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 RHOT2Q8IXI1 618 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 ATPAF2Q8N5M1 289 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 FAM71BQ8TC56 605 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 CXorf40AQ8TE69 158 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 ADAMTS14Q8WXS8 1223 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 TSC1Q92574 1164 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 BTBD6Q96KE9 485 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 EXOC2Q96KP1 924 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 PSKH2Q96QS6 385 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 ZNF670Q9BS34 389 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 TRIM5Q9C035 493 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 SUV39H2Q9H5I1 410 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 KLHL11Q9NVR0 708 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 WASF3Q9UPY6 502 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 ASPMQ8IZT6 3477 aa17.94■□□□□ 0.46
SHKBP1-204ENST00000594862 TRPM6Q9BX84 2022 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 TOR1BO14657 336 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 CDK4P11802 303 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 TCF4P15884 667 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 NFKBIAP25963 317 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 ARHGAP25P42331 645 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 RABIFP47224 123 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 POLR2LP62875 67 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 IL9RQ01113 521 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 ZNF235Q14590 738 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 LBRQ14739 615 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 RALGPS1Q5JS13 557 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 GCNT7Q6ZNI0 430 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 RAB44Q7Z6P3 723 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 SRLQ86TD4 932 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 SPATS2Q86XZ4 545 aaKnown RBP17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 KLK6Q92876 244 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 VOPP1Q96AW1 172 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 MYOCQ99972 504 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 CALN1Q9BXU9 219 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 NHEJ1Q9H9Q4 299 aaPredicted RBP17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 INTUQ9ULD6 942 aa17.93■□□□□ 0.46
SHKBP1-204ENST00000594862 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 TM7SF2O76062 418 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 AMPD1P23109 780 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 ADKP55263 362 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 BCL2L1Q07817 233 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 SHBQ15464 509 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 UGP2Q16851 508 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 HS1BP3Q53T59 392 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 PTAR1Q7Z6K3 402 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 PAF1Q8N7H5 531 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 SCNM1Q9BWG6 230 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 FZD3Q9NPG1 666 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 BTBD3Q9Y2F9 522 aa17.92■□□□□ 0.46
SHKBP1-204ENST00000594862 CFAP69A5D8W1 941 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 TMEM8BA6NDV4 472 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 IGLON5A6NGN9 336 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 H3BM21 787 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 ZZEF1O43149 2961 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 MTA2O94776 668 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 PIGNO95427 931 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 PAK4O96013 591 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 TBX2Q13207 712 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 TMEM52BQ4KMG9 183 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 TXNRD3NBQ6F5E7 133 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 Q6ZSR6 202 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 KCTD6Q8NC69 237 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 TSEN2Q8NCE0 465 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 OR13H1Q8NG92 308 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 RFFLQ8WZ73 363 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 SPOCK2Q92563 424 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 PACSIN1Q9BY11 444 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 LUC7LQ9NQ29 371 aaKnown RBP17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 GPR27Q9NS67 375 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 ITM2BQ9Y287 266 aa17.91■□□□□ 0.46
SHKBP1-204ENST00000594862 CA5BQ9Y2D0 317 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms