RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 NSMCE4AQ9NXX6 385 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 CDH7Q9ULB5 785 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 GJB3O75712 270 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 CD160O95971 181 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 SNRPAP09012 282 aaKnown RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 ERVK-10P10266 1014 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 ALADP13716 330 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 POLR2EP19388 210 aaKnown RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 NNMTP40261 264 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 RGRP47804 291 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 FUT11Q495W5 492 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 EMC10Q5UCC4 262 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 MARK2Q7KZI7 788 aaKnown RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 YAF2Q8IY57 180 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 RYBPQ8N488 228 aaPredicted RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 BLOC1S5Q8TDH9 187 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 PDCD6IPQ8WUM4 868 aaKnown RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 MTBPQ96DY7 904 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 RANBP9Q96S59 729 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 TDRD1Q9BXT4 1180 aaKnown RBP15.06■□□□□ 0
GTF2F1-202ENST00000593678 TM6SF2Q9BZW4 377 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 TRABDQ9H4I3 376 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 NKIRAS1Q9NYS0 192 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 LHX3Q9UBR4 397 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 SLC8A2Q9UPR5 921 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 RAI2Q9Y5P3 530 aa15.06■□□□□ 0
GTF2F1-202ENST00000593678 ZCWPW2A0A1B0GU75 182 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 CCDC78A2IDD5 438 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 HEPACAM2A8MVW5 462 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 CXorf49A8MYA2 514 aaPredicted RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 MT-CO1P00395 513 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 CYP17A1P05093 508 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 NMBRP28336 390 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 EPHB1P54762 984 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 SNRPD1P62314 119 aaKnown RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 ECT2LQ008S8 904 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 ADAM15Q13444 863 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 GALNT3Q14435 633 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 PDGFRLQ15198 375 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 ACCSLQ4AC99 568 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 SRLQ86TD4 932 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 NAT16Q8N8M0 369 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 FCRL3Q96P31 734 aaPredicted RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 TRPV4Q9HBA0 871 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 PRKAG3Q9UGI9 489 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 INTS6Q9UL03 887 aaKnown RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 SMG5Q9UPR3 1016 aaKnown RBP15.05■□□□□ -0
GTF2F1-202ENST00000593678 CHKBQ9Y259 395 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 MYOFQ9NZM1 2061 aa15.05■□□□□ -0
GTF2F1-202ENST00000593678 CDH23Q9H251 3354 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 CRTAMO95727 393 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 ATXN1LP0C7T5 689 aaKnown RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 DGKGP49619 791 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 RAD51Q06609 339 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 THOC5Q13769 683 aaKnown RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 SEPT7Q16181 437 aaKnown RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 EML3Q32P44 896 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 HSP90AA5PQ58FG0 334 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 ATXN7L2Q5T6C5 722 aaPredicted RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 TRIM68Q6AZZ1 485 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 NCEH1Q6PIU2 408 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 UNC5BQ8IZJ1 945 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 LPCAT1Q8NF37 534 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 ALKBH8Q96BT7 664 aaKnown RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 RPL10LQ96L21 214 aaKnown RBP15.04■□□□□ -0
GTF2F1-202ENST00000593678 CPNE1Q99829 537 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 SMYD2Q9NRG4 433 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 CLDND1Q9NY35 253 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.04■□□□□ -0
GTF2F1-202ENST00000593678 HS3ST2Q9Y278 367 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 PCDHGC4Q9Y5F7 938 aa15.04■□□□□ -0
GTF2F1-202ENST00000593678 TMEM120BA0PK00 339 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 K7ERQ8 282 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 HOXC11O43248 304 aaPredicted RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 VAPBO95292 243 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 PAPSS2O95340 614 aaPredicted RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 KRT4P19013 534 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 GP5P40197 560 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 MDH1P40925 334 aaKnown RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 RECQLP46063 649 aaPredicted RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 GNGT1P63211 74 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 BCL2L1Q07817 233 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 SMAD1Q15797 465 aaKnown RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 OR2AP1Q8NGE2 309 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 BRSK1Q8TDC3 778 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 WFIKKN2Q8TEU8 576 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 DYDC1Q8WWB3 177 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 FAM167BQ9BTA0 163 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 CEP44Q9C0F1 390 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 EBF3Q9H4W6 596 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 ATP13A3Q9H7F0 1226 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 IARS2Q9NSE4 1012 aaKnown RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 INTS9Q9NV88 658 aaKnown RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 IL1RAPL1Q9NZN1 696 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 TRIM49D1C9J1S8 452 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 SMAD6O43541 496 aaKnown RBP15.03■□□□□ -0
GTF2F1-202ENST00000593678 FAM155BO75949 473 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 C1QAP02745 245 aa15.03■□□□□ -0
GTF2F1-202ENST00000593678 ATP5BP06576 529 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms