RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CELA2BP08218 269 aaPredicted RBP16.57■□□□□ 0.24
LIG1-205ENST00000593425 PLEKP08567 350 aaPredicted RBP16.57■□□□□ 0.24
LIG1-205ENST00000593425 ERCC5P28715 1186 aaPredicted RBP16.57■□□□□ 0.24
LIG1-205ENST00000593425 PTPN9P43378 593 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 KLK7P49862 253 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 SKOR1P84550 965 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 CDR2Q01850 454 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 RHDQ02161 417 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 PTK2BQ14289 1009 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 GDPD4Q6W3E5 623 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 STRADAQ7RTN6 431 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 ZNF677Q86XU0 584 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 CENPIQ92674 756 aaPredicted RBP16.57■□□□□ 0.24
LIG1-205ENST00000593425 ARHGEF26Q96DR7 871 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 SLC46A1Q96NT5 459 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 EPAS1Q99814 870 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 DPH1Q9BZG8 443 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 SEMA4CQ9C0C4 833 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 CLPBQ9H078 707 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 KLC2Q9H0B6 622 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 NOL6Q9H6R4 1146 aaKnown RBP16.57■□□□□ 0.24
LIG1-205ENST00000593425 HPCAL4Q9UM19 191 aa16.57■□□□□ 0.24
LIG1-205ENST00000593425 TM7SF2O76062 418 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 TSHRP16473 764 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 RBMS1P29558 406 aaKnown RBP16.56■□□□□ 0.24
LIG1-205ENST00000593425 EIF4A3P38919 411 aaKnown RBP16.56■□□□□ 0.24
LIG1-205ENST00000593425 YPEL5P62699 121 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 TCP11X2Q5H9J9 407 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 FOXR1Q6PIV2 292 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 MACC1Q6ZN28 852 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 TTC7BQ86TV6 843 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 PYROXD2Q8N2H3 581 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 TPCN2Q8NHX9 752 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 FAM172AQ8WUF8 416 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 GRAMD1AQ96CP6 724 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 GDAP1L1Q96MZ0 367 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 CCDC3Q9BQI4 270 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 SSUH2Q9Y2M2 353 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 PCDHGA8Q9Y5G5 932 aa16.56■□□□□ 0.24
LIG1-205ENST00000593425 ANKRD36A6QL64 1941 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 CDRT15L2A8MXV6 281 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 LMO7DNF2Z398 122 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 RIOK3O14730 519 aaKnown RBP16.55■□□□□ 0.24
LIG1-205ENST00000593425 EPHB6O15197 1021 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 YY2O15391 372 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 INSIG1O15503 277 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 BUB1O43683 1085 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 TCEA3O75764 348 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 IGSF6O95976 241 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 ANXA6P08133 673 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 JAM2P57087 298 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 VAC14Q08AM6 782 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 IRF4Q15306 451 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 KLHL40Q2TBA0 621 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 FAXCQ5TGI0 409 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 NYAP1Q6ZVC0 841 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 ZNF354CQ86Y25 554 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 CXorf40AQ8TE69 158 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
LIG1-205ENST00000593425 TTC9Q92623 222 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 NAT6Q93015 286 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 NTAN1Q96AB6 310 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 TBATAQ96M53 351 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 PCDHB18PQ96TA0 734 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 WRAP53Q9BUR4 548 aaKnown RBP16.55■□□□□ 0.24
LIG1-205ENST00000593425 SLC13A1Q9BZW2 595 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 TTYH3Q9C0H2 523 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 SYNDIG1Q9H7V2 258 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 NLRC4Q9NPP4 1024 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 COQ6Q9Y2Z9 468 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 MGAQ8IWI9 3026 aa16.55■□□□□ 0.24
LIG1-205ENST00000593425 ZSCAN5CA6NGD5 496 aaPredicted RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 TIMP2P16035 220 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 GPD1P21695 349 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 EEF1GP26641 437 aaKnown RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 RFC1P35251 1148 aaPredicted RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 SOX5P35711 763 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 RPIAP49247 311 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 POLR2FP61218 127 aaKnown RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 RHOAP61586 193 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 PPARDQ03181 441 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 LY6DQ14210 128 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 TCEA2Q15560 299 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 RTL3Q8N8U3 475 aaKnown RBP16.54■□□□□ 0.24
LIG1-205ENST00000593425 GLMNQ92990 594 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 HMCESQ96FZ2 354 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 WBP1Q96G27 269 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 EXOC2Q96KP1 924 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 C1QTNF7Q9BXJ2 289 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 VPS16Q9H269 839 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 LHX3Q9UBR4 397 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 DACH1Q9UI36 760 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 RABGEF1Q9UJ41 708 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 PADI4Q9UM07 663 aa16.54■□□□□ 0.24
LIG1-205ENST00000593425 KALRNO60229 2985 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 PIGNO95427 931 aa16.53■□□□□ 0.24
LIG1-205ENST00000593425 KRT3P12035 628 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms