RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TCEAL2Q9H3H9 227 aaPredicted RBP20.73■□□□□ 0.91
TRIM47-207ENST00000593089 FZD10Q9ULW2 581 aa20.73■□□□□ 0.91
TRIM47-207ENST00000593089 SMG1Q96Q15 3661 aaKnown RBP20.73■□□□□ 0.91
TRIM47-207ENST00000593089 ASXL3Q9C0F0 2248 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 TCRBV5S1A1TA0A578 114 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 RASA4BC9J798 803 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 INSIG1O15503 277 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 RASA4O43374 803 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 RPL7AP62424 266 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 GABREP78334 506 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 MYL5Q02045 173 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 C1orf61Q13536 156 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 PTK2BQ14289 1009 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 INO80DQ53TQ3 878 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 GUSBP11Q6P575 273 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 SASS6Q6UVJ0 657 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 CLEC17AQ6ZS10 378 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 EFL1Q7Z2Z2 1120 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 PHACTR4Q8IZ21 702 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 BTN2A2Q8WVV5 523 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 NAF1Q96HR8 494 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 EXOC2Q96KP1 924 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 EPAS1Q99814 870 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 CATSPERBQ9H7T0 1116 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 MBNL1Q9NR56 388 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 SPASTQ9UBP0 616 aa20.72■□□□□ 0.91
TRIM47-207ENST00000593089 APOBEC3BQ9UH17 382 aaKnown RBP20.72■□□□□ 0.91
TRIM47-207ENST00000593089 PIGNO95427 931 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 TIMP2P16035 220 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 CDK11BP21127 795 aaKnown RBP20.71■□□□□ 0.91
TRIM47-207ENST00000593089 TGM2P21980 687 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 YBEYP58557 167 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-207ENST00000593089 SERINC3Q13530 473 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 KLHL40Q2TBA0 621 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 PRRT3Q5FWE3 981 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 CRTC1Q6UUV9 634 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 LGMNQ99538 433 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 NCAPGQ9BPX3 1015 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 C1QTNF7Q9BXJ2 289 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 ANO10Q9NW15 660 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 NCKIPSDQ9NZQ3 722 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 LHX3Q9UBR4 397 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 SALL4Q9UJQ4 1053 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 PNMA8BQ9ULN7 279 aaPredicted RBP20.71■□□□□ 0.91
TRIM47-207ENST00000593089 MFHAS1Q9Y4C4 1052 aa20.71■□□□□ 0.91
TRIM47-207ENST00000593089 TPP1O14773 563 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 GCATO75600 419 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 XPAP23025 273 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-207ENST00000593089 ADKP55263 362 aaKnown RBP20.7■□□□□ 0.9
TRIM47-207ENST00000593089 YPEL5P62699 121 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 TLE3Q04726 772 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 CYTH1Q15438 398 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 NR0B2Q15466 257 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 PARP15Q460N3 678 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 PPP1R15BQ5SWA1 713 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 FAXCQ5TGI0 409 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 DCUN1D2Q6PH85 259 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 SPACA3Q8IXA5 215 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 UMODL1-AS1Q8N2C9 162 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 TP53I13Q8NBR0 393 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-207ENST00000593089 ZNF578Q96N58 590 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-207ENST00000593089 ERGIC2Q96RQ1 377 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 CNPY3Q9BT09 278 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 LRRC61Q9BV99 259 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 DKK3Q9UBP4 350 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 COQ6Q9Y2Z9 468 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 COL27A1Q8IZC6 1860 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-207ENST00000593089 LRRK1Q38SD2 2015 aa20.7■□□□□ 0.9
TRIM47-207ENST00000593089 EME2A4GXA9 379 aaPredicted RBP20.69■□□□□ 0.9
TRIM47-207ENST00000593089 WASH4PA8MWX3 477 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 MUSKO15146 869 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 PRB1P04280 392 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 EIF4A3P38919 411 aaKnown RBP20.69■□□□□ 0.9
TRIM47-207ENST00000593089 AIF1P55008 147 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 PCBP4P57723 403 aaKnown RBP20.69■□□□□ 0.9
TRIM47-207ENST00000593089 OGDHQ02218 1023 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 IRF4Q15306 451 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 STX1AQ16623 288 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 ISXQ2M1V0 245 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 ACAD10Q6JQN1 1059 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 MCOLN2Q8IZK6 566 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 LSMEM2Q8N112 164 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 ZNF248Q8NDW4 579 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 CPEB1Q9BZB8 566 aaKnown RBP20.69■□□□□ 0.9
TRIM47-207ENST00000593089 SLC13A1Q9BZW2 595 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 POLR1BQ9H9Y6 1135 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 GPATCH2LQ9NWQ4 482 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 UBA2Q9UBT2 640 aaPredicted RBP20.69■□□□□ 0.9
TRIM47-207ENST00000593089 PTPRQQ9UMZ3 2332 aa20.69■□□□□ 0.9
TRIM47-207ENST00000593089 FGF10O15520 208 aaPredicted RBP20.68■□□□□ 0.9
TRIM47-207ENST00000593089 ANXA6P08133 673 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 FERP16591 822 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 DESP17661 470 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 LSSP48449 732 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 TPI1P60174 286 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 CXADRP78310 365 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 PPARDQ03181 441 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 ELP6Q0PNE2 266 aa20.68■□□□□ 0.9
TRIM47-207ENST00000593089 TMEM52BQ4KMG9 183 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms