RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TMEM248Q9NWD8 314 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 MARCH2Q9P0N8 246 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 BCAP29Q9UHQ4 241 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 PRPF19Q9UMS4 504 aaKnown RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ANKRD6Q9Y2G4 727 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 AAR2Q9Y312 384 aaKnown RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 BACE2Q9Y5Z0 518 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ENO4A6NNW6 628 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 TRIM13O60858 407 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 TBX18O95935 607 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ATF6P18850 670 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ITGA9Q13797 1035 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ANKRD20A4Q4UJ75 823 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 C1orf53Q5VUE5 145 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 CWF19L1Q69YN2 538 aaKnown RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 FBXO46Q6PJ61 603 aaPredicted RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 PRSS55Q6UWB4 352 aaPredicted RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 SDCCAG8Q86SQ7 713 aaPredicted RBP14.43□□□□□ -0.1
RANBP3-229ENST00000592771 LINC00523Q86TU6 105 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 TMEM126BQ8IUX1 230 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 DNAAF3Q8N9W5 541 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 CNDP1Q96KN2 507 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 BTBD9Q96Q07 612 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 SERPINI1Q99574 410 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 VN1R3Q9BXE9 311 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 ZYG11BQ9C0D3 744 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 CWH43Q9H720 699 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 SLC17A6Q9P2U8 582 aa14.43□□□□□ -0.1
RANBP3-229ENST00000592771 DRGXA6NNA5 263 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 SLC38A8A6NNN8 435 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 SLCO1B7G3V0H7 640 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 ADAM12O43184 909 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 ANXA9O76027 345 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 SNUPNO95149 360 aaKnown RBP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 HSPA4LO95757 839 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 PEX11BO96011 259 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 ERVK-10P10266 1014 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 THRAP10827 490 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 COX4I1P13073 169 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 ITGAXP20702 1163 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 POLD2P49005 469 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 MTTPP55157 894 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 TLE2Q04725 743 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CDH17Q12864 832 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CCNIQ14094 377 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 PSMD5Q16401 504 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 C10orf120Q5SQS8 335 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CERCAMQ5T4B2 595 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 RNF220Q5VTB9 566 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CES3Q6UWW8 571 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CCDC117Q8IWD4 279 aaPredicted RBP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 FBXO22Q8NEZ5 403 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 ZNF669Q96BR6 464 aaPredicted RBP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 UBE2OQ9C0C9 1292 aaKnown RBP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 CRISPLD2Q9H0B8 497 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 IPO11Q9UI26 975 aaKnown RBP14.42□□□□□ -0.1
RANBP3-229ENST00000592771 VPS28Q9UK41 221 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 TBX21Q9UL17 535 aa14.42□□□□□ -0.1
RANBP3-229ENST00000592771 LTBP2Q14767 1821 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 MEI4A8MW99 385 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 G3V2L1 256 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 HLA-DQB2P05538 268 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 UQCRBP14927 111 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 NCF2P19878 526 aaPredicted RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 GLDCP23378 1020 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ADRA1AP35348 466 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 KLF10Q13118 480 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 MTA1Q13330 715 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 MED21Q13503 144 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 USP41Q3LFD5 358 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 STRA8Q7Z7C7 330 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ST13P4Q8IZP2 240 aaPredicted RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 SLC26A7Q8TE54 656 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 CENPKQ9BS16 269 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 KIFC1Q9BW19 673 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ILKAPQ9H0C8 392 aaPredicted RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 COG4Q9H9E3 785 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 POMPQ9Y244 141 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 A0A096LPK6 155 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ALDH7A1P49419 539 aaKnown RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 KPNA1P52294 538 aaPredicted RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 GEMP55040 296 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 TNK2Q07912 1038 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 TBL3Q12788 808 aaKnown RBP14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ANO4Q32M45 955 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 ALFQ53S48 1182 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 PPM1JQ5JR12 505 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 RALGPS1Q5JS13 557 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 DENND5AQ6IQ26 1287 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 FSTL4Q6MZW2 842 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 FBXL22Q6P050 247 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 C16orf89Q6UX73 402 aa14.41□□□□□ -0.1
RANBP3-229ENST00000592771 DEFB128Q7Z7B8 93 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms