RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 DCUN1D2Q6PH85 259 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 PHLDB2Q86SQ0 1253 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 TTC7BQ86TV6 843 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 CCDC185Q8N715 623 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 ZNF248Q8NDW4 579 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 WDR48Q8TAF3 677 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 IFI44Q8TCB0 444 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 MAPK15Q8TD08 544 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 CENPIQ92674 756 aaPredicted RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 BMFQ96LC9 184 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 KLHL32Q96NJ5 620 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 LGMNQ99538 433 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 C1QTNF2Q9BXJ5 285 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 SLC13A1Q9BZW2 595 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 TTYH3Q9C0H2 523 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 NDFIP2Q9NV92 336 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 APOBEC3BQ9UH17 382 aaKnown RBP10.28□□□□□ -0.76
VMP1-214ENST00000592106 SALL4Q9UJQ4 1053 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 SIK3Q9Y2K2 1263 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 TRPM6Q9BX84 2022 aa10.28□□□□□ -0.76
VMP1-214ENST00000592106 SIGLEC16A6NMB1 481 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 FAM72CH0Y354 149 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 RNF103O00237 685 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 TPP1O14773 563 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 CCP110O43303 1012 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 TLX3O43711 291 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 CREB3O43889 395 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 NEBLO76041 1014 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 GJB6O95452 261 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 CD160O95971 181 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 FERP16591 822 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 RFC1P35251 1148 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 BLKP51451 505 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ZNF143P52747 638 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 UCNP55089 124 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 TPI1P60174 286 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 PFN3P60673 137 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 GABREP78334 506 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 UBXN1Q04323 297 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 PTP4A2Q12974 167 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 NR0B2Q15466 257 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ZNF542PQ5EBM4 170 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ARTNQ5T4W7 220 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ATXN7L2Q5T6C5 722 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 FAM72AQ5TYM5 149 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 FAM72DQ6L9T8 149 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ERAP2Q6P179 960 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 WDR59Q6PJI9 974 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 CLEC17AQ6ZS10 378 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 FAM72BQ86X60 149 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 DNAAF5Q86Y56 855 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 PAF1Q8N7H5 531 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ATL2Q8NHH9 583 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 LMX1AQ8TE12 382 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 NAT6Q93015 286 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 GRAMD1AQ96CP6 724 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ZNF578Q96N58 590 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 FCRL3Q96P31 734 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 MCEEQ96PE7 176 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 KLF6Q99612 283 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 CNPY3Q9BT09 278 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 FANCLQ9NW38 375 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 UBA2Q9UBT2 640 aaPredicted RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 LIMA1Q9UHB6 759 aaKnown RBP10.27□□□□□ -0.77
VMP1-214ENST00000592106 DOLKQ9UPQ8 538 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 NEU3Q9UQ49 428 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ITM2BQ9Y287 266 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 ACTL7AQ9Y615 435 aa10.27□□□□□ -0.77
VMP1-214ENST00000592106 TMEM110-MUSTN1A8MSY1 372 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 WASH4PA8MWX3 477 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 EIF3CLB5ME19 914 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 AREL1O15033 823 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 EPHB6O15197 1021 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 RAD51BO15315 384 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 ANXA6P08133 673 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 GIMD1P0DJR0 217 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 HTR1BP28222 390 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 GKP32189 559 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 IGFALSP35858 605 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 CCDC173Q0VFZ6 552 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 CDKN3Q16667 212 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 RAB6CQ53S08 254 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 FAXCQ5TGI0 409 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 CDCP2Q5VXM1 449 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 ESRP1Q6NXG1 681 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 MACC1Q6ZN28 852 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 RBM43Q6ZSC3 357 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 MON1BQ7L1V2 547 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 EFL1Q7Z2Z2 1120 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 VPS36Q86VN1 386 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 PHACTR4Q8IZ21 702 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 FSTL5Q8N475 847 aaPredicted RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 HCAR2Q8TDS4 363 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 SCG3Q8WXD2 468 aaKnown RBP10.26□□□□□ -0.77
VMP1-214ENST00000592106 HMCESQ96FZ2 354 aa10.26□□□□□ -0.77
VMP1-214ENST00000592106 ERGIC2Q96RQ1 377 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms