RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 NSMCE4AQ9NXX6 385 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 CCDC167Q9P0B6 97 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 ANKRD6Q9Y2G4 727 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 TSC2P49815 1807 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 CRHR2Q13324 411 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 CLEC6AQ6EIG7 209 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 BNC2Q6ZN30 1099 aaPredicted RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 BLOC1S5Q8TDH9 187 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 HDAC10Q969S8 669 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 IL12RB2Q99665 862 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 UBE2OQ9C0C9 1292 aaKnown RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 NCKIPSDQ9NZQ3 722 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 GMIPQ9P107 970 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 A0A0U1RQF3 1178 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 MTTPP55157 894 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 CDH13P55290 713 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 LPIN1Q14693 890 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 KCNA10Q16322 511 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 OR52E8Q6IFG1 317 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 SPATA24Q86W54 205 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 GALNT4Q8N4A0 578 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 RTL3Q8N8U3 475 aaKnown RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 SPDYE1Q8NFV5 336 aaPredicted RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 OR52K2Q8NGK3 314 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 SH3RF2Q8TEC5 729 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 DPF3Q92784 378 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 COPS7BQ9H9Q2 264 aaPredicted RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 WDR41Q9HAD4 459 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 TNFRSF12AQ9NP84 129 aa16.91■□□□□ 0.3
CTDP1-207ENST00000591598 COPG1Q9Y678 874 aaKnown RBP16.91■□□□□ 0.3
CTDP1-207ENST00000591598 KCNU1A8MYU2 1149 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 PSMD3O43242 534 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 MED21Q13503 144 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 MARC1Q5VT66 337 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 BHLHE22Q8NFJ8 381 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-207ENST00000591598 GATA6Q92908 595 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 HAPLN3Q96S86 360 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 TRPA1O75762 1119 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 ARSDP51689 593 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 FKBP1BP68106 108 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 POTEHQ6S545 545 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 ANKRD49Q8WVL7 239 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 SMOC2Q9H3U7 446 aa16.9■□□□□ 0.3
CTDP1-207ENST00000591598 UXTQ9UBK9 157 aaPredicted RBP16.9■□□□□ 0.3
CTDP1-207ENST00000591598 C9JVG2 144 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 FGF10O15520 208 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 SUPT7LO94864 414 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 CRABP2P29373 138 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 FLT3LGP49771 235 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 TBX4P57082 545 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 BRMS1LQ5PSV4 323 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 GPR158Q5T848 1215 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 RASIP1Q5U651 963 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 C17orf99Q6UX52 265 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 CFAP52Q8N1V2 620 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 RPRD1AQ96P16 312 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 GPR78Q96P69 363 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 TSGA13Q96PP4 275 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 MCMBPQ9BTE3 642 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 TRPC7Q9HCX4 862 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 DNAJB4Q9UDY4 337 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 ACTL7AQ9Y615 435 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 AP3B1O00203 1094 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 H2AFYO75367 372 aaKnown RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 GPC4O75487 556 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 ELNP15502 786 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 HOXC8P31273 242 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 HADHAP40939 763 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 SERPINH1P50454 418 aaKnown RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 MS4A2Q01362 244 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 GRIK3Q13003 919 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 FAM83EQ2M2I3 478 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 CMPK2Q5EBM0 449 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 AAGABQ6PD74 315 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 RANBP10Q6VN20 620 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 PBX3P40426 434 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 DPP6P42658 865 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 MAPRE1Q15691 268 aaKnown RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 C10orf120Q5SQS8 335 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 FOXB2Q5VYV0 432 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 METTL21CQ5VZV1 264 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 KDM1BQ8NB78 822 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 SERPINI1Q99574 410 aa16.89■□□□□ 0.29
CTDP1-207ENST00000591598 NOL6Q9H6R4 1146 aaKnown RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 MARCH4Q9P2E8 410 aaPredicted RBP16.89■□□□□ 0.29
CTDP1-207ENST00000591598 FAM163BP0C2L3 166 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 SOX11P35716 441 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-207ENST00000591598 CEACAM7Q14002 265 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 GALNT3Q14435 633 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 LBRQ14739 615 aaKnown RBP16.88■□□□□ 0.29
CTDP1-207ENST00000591598 TIGD7Q6NT04 549 aaPredicted RBP16.88■□□□□ 0.29
CTDP1-207ENST00000591598 C16orf89Q6UX73 402 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 OR9I1Q8NGQ6 314 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 PPP2R3CQ969Q6 453 aa16.88■□□□□ 0.29
CTDP1-207ENST00000591598 LRGUKQ96M69 825 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms