RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 TMPRSS12Q86WS5 348 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 LRRC57Q8N9N7 239 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 EXD1Q8NHP7 514 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 RAPGEF5Q92565 580 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 HMCESQ96FZ2 354 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 RNF157Q96PX1 679 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 GOLPH3Q9H4A6 298 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 SP110Q9HB58 689 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 TM9SF3Q9HD45 589 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 LZTFL1Q9NQ48 299 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 TRIM10Q9UDY6 481 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 SLCO3A1Q9UIG8 710 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.51■■□□□ 1.35
LSM7-206ENST00000591515 PCDHA3Q9Y5H8 950 aa23.51■■□□□ 1.35
LSM7-206ENST00000591515 H0Y8X5 98 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 DFFAO00273 331 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 ZMPSTE24O75844 475 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 CD48P09326 243 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 SRCP12931 536 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 MX2P20592 715 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 IL4RP24394 825 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 RWDD2BP57060 319 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 MMRN1Q13201 1228 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 DLG2Q15700 870 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 TMCO4Q5TGY1 634 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 AFMIDQ63HM1 303 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 CCDC50Q8IVM0 306 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 LSM14AQ8ND56 463 aaKnown RBP23.5■■□□□ 1.35
LSM7-206ENST00000591515 NSMCE1Q8WV22 266 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 RNF25Q96BH1 459 aaPredicted RBP23.5■■□□□ 1.35
LSM7-206ENST00000591515 MYO19Q96H55 970 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 CELF6Q96J87 481 aaKnown RBP23.5■■□□□ 1.35
LSM7-206ENST00000591515 FCRL3Q96P31 734 aaPredicted RBP23.5■■□□□ 1.35
LSM7-206ENST00000591515 SLC39A8Q9C0K1 460 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 NOL6Q9H6R4 1146 aaKnown RBP23.5■■□□□ 1.35
LSM7-206ENST00000591515 FTSJ1Q9UET6 329 aa23.5■■□□□ 1.35
LSM7-206ENST00000591515 TTC34A8MYJ7 566 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 APOL1O14791 398 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ALOX15BO15296 676 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ACSL1P33121 698 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 NUMBP49757 651 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 PAPOLAP51003 745 aaKnown RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 COPS2P61201 443 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ARF5P84085 180 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 IL9RQ01113 521 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ZBTB16Q05516 673 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ELAVL3Q14576 367 aaKnown RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 PAFAH1B3Q15102 231 aaKnown RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 TEAD4Q15561 434 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 INO80DQ53TQ3 878 aaPredicted RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 BZW1Q7L1Q6 419 aaKnown RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 RFX6Q8HWS3 928 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 ATPAF2Q8N5M1 289 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 PCDH20Q8N6Y1 951 aaKnown RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 PCDH19Q8TAB3 1148 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 OR8D1Q8WZ84 308 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 PRSS16Q9NQE7 514 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 HAUS2Q9NVX0 235 aa23.49■■□□□ 1.35
LSM7-206ENST00000591515 UBA2Q9UBT2 640 aaPredicted RBP23.49■■□□□ 1.35
LSM7-206ENST00000591515 ATMQ13315 3056 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 SEMG2Q02383 582 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 IL10RBQ08334 325 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 RFTN1Q14699 578 aaPredicted RBP23.48■■□□□ 1.35
LSM7-206ENST00000591515 TFDP3Q5H9I0 405 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 ZNF776Q68DI1 518 aaPredicted RBP23.48■■□□□ 1.35
LSM7-206ENST00000591515 C22orf39Q6P5X5 142 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 LINGO4Q6UY18 593 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 LRRC69Q6ZNQ3 347 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 NT5DC3Q86UY8 548 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 BBS5Q8N3I7 341 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 ZNF366Q8N895 744 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 TRIM58Q8NG06 486 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 ISG20Q96AZ6 181 aaKnown RBP23.48■■□□□ 1.35
LSM7-206ENST00000591515 KLC2Q9H0B6 622 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 SCML1Q9UN30 329 aa23.48■■□□□ 1.35
LSM7-206ENST00000591515 ARID1BQ8NFD5 2236 aaPredicted RBP23.48■■□□□ 1.35
LSM7-206ENST00000591515 PRAMEF11O60813 436 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 SIN3BO75182 1162 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 DNTTP04053 509 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 GLDCP23378 1020 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 MSNP26038 577 aaKnown RBP23.47■■□□□ 1.35
LSM7-206ENST00000591515 CTSKP43235 329 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 TTC31Q49AM3 519 aaPredicted RBP23.47■■□□□ 1.35
LSM7-206ENST00000591515 SPOCD1Q6ZMY3 1216 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 ARHGAP12Q8IWW6 846 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 NPWQ8N729 165 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 ZNF599Q96NL3 588 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 IPO11Q9UI26 975 aaKnown RBP23.47■■□□□ 1.35
LSM7-206ENST00000591515 CAPN6Q9Y6Q1 641 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 CHD5Q8TDI0 1954 aa23.47■■□□□ 1.35
LSM7-206ENST00000591515 GOLGA6L9A6NEM1 432 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 C1QTNF3-AMACRE9PGA6 284 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 MT-CO1P00395 513 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 SNRPD1P62314 119 aaKnown RBP23.46■■□□□ 1.35
LSM7-206ENST00000591515 PPP2R5EQ16537 467 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 C9orf64Q5T6V5 341 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 FAM46CQ5VWP2 391 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 NCBP2-AS2Q69YL0 99 aa23.46■■□□□ 1.35
LSM7-206ENST00000591515 TIGD7Q6NT04 549 aaPredicted RBP23.46■■□□□ 1.35
LSM7-206ENST00000591515 PCSK4Q6UW60 755 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms