RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NSMCE3Q96MG7 304 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 USP29Q9HBJ7 922 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 SGK2Q9HBY8 427 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 GLOD4Q9HC38 313 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 HOMER3Q9NSC5 361 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 WSB2Q9NYS7 404 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-214ENST00000590556 DKK3Q9UBP4 350 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 MBD1Q9UIS9 605 aaPredicted RBP19.35■□□□□ 0.69
DDX39A-214ENST00000590556 FANCMQ8IYD8 2048 aa19.35■□□□□ 0.69
DDX39A-214ENST00000590556 CFAP69A5D8W1 941 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 C16orf96A6NNT2 1141 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 SLC7A4O43246 635 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 NDUFS2O75306 463 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 NEK3P51956 506 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 FBXL19Q6PCT2 694 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 SLC36A4Q6YBV0 504 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 PARS2Q7L3T8 475 aaKnown RBP19.34■□□□□ 0.69
DDX39A-214ENST00000590556 FAM71DQ8N9W8 422 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 HCAR2Q8TDS4 363 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 TMEM121Q9BTD3 319 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 BTBD1Q9H0C5 482 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 SLC25A51Q9H1U9 297 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 SMARCAL1Q9NZC9 954 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 ZNF148Q9UQR1 794 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 PCDHGC4Q9Y5F7 938 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 NUMA1Q14980 2115 aa19.34■□□□□ 0.69
DDX39A-214ENST00000590556 SOCS5O75159 536 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 SERPINF2P08697 491 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 BCKDHBP21953 392 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 ACSL1P33121 698 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 CD86P42081 329 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 SIM2Q14190 667 aaPredicted RBP19.33■□□□□ 0.68
DDX39A-214ENST00000590556 OASLQ15646 514 aaKnown RBP19.33■□□□□ 0.68
DDX39A-214ENST00000590556 PIP5KL1Q5T9C9 394 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 AGBL4Q5VU57 503 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 BRAT1Q6PJG6 821 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 PRELID2Q8N945 189 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 OR14C36Q8NHC7 312 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 FAM131CQ96AQ9 280 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 IMP4Q96G21 291 aaKnown RBP19.33■□□□□ 0.68
DDX39A-214ENST00000590556 CAPZA3Q96KX2 299 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 AP1M1Q9BXS5 423 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 ABCA7Q8IZY2 2146 aa19.33■□□□□ 0.68
DDX39A-214ENST00000590556 TSPAN11A1L157 253 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 C5orf60A6NFR6 353 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 TRAFD1O14545 582 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 SEMA4FO95754 770 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 MMP2P08253 660 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 ADRB3P13945 408 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 TIMP2P16035 220 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 NFKB1P19838 968 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 XPAP23025 273 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 STIP1P31948 543 aaKnown RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 CD68P34810 354 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 RPL6Q02878 288 aaKnown RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 TRAF2Q12933 501 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 ANKRD20A2Q5SQ80 823 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 ANKRD20A1Q5TYW2 823 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 ANKRD20A3Q5VUR7 823 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 ITPRIPL1Q6GPH6 555 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 DRICH1Q6PGQ1 229 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 TTC7BQ86TV6 843 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 CCDC110Q8TBZ0 833 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 PDCD6IPQ8WUM4 868 aaKnown RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 SPATA13Q96N96 652 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 RBM15Q96T37 977 aaKnown RBP eCLIP19.32■□□□□ 0.686e-8■■■□□ 16.6
DDX39A-214ENST00000590556 GPR174Q9BXC1 333 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 RSPH14Q9UHP6 348 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 DRG1Q9Y295 367 aaKnown RBP19.32■□□□□ 0.68
DDX39A-214ENST00000590556 RAI2Q9Y5P3 530 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 WDFY4Q6ZS81 3184 aa19.32■□□□□ 0.68
DDX39A-214ENST00000590556 SPAG17Q6Q759 2223 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 GOLGA6L10A0A0M3HER8 536 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 A0A1W2PQ67 120 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 FAM47DPA6NHR8 397 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 LRRC72A6NJI9 287 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 HTRA2O43464 458 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-214ENST00000590556 ITGAVP06756 1048 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 CA4P22748 312 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 ADPRHP54922 357 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 POLR2LP62875 67 aaKnown RBP19.31■□□□□ 0.68
DDX39A-214ENST00000590556 SKOR1P84550 965 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 IHHQ14623 411 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 ARMC12Q5T9G4 340 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 PRR23BQ6ZRT6 265 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 LPCAT2Q7L5N7 544 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 PRPF39Q86UA1 669 aaKnown RBP19.31■□□□□ 0.68
DDX39A-214ENST00000590556 ZSCAN30Q86W11 494 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 CREG2Q8IUH2 290 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 RAB7BQ96AH8 199 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 ECHDC3Q96DC8 303 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 FCRL5Q96RD9 977 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 FAM86C1Q9NVL1 165 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 PCDHB9Q9Y5E1 797 aa19.31■□□□□ 0.68
DDX39A-214ENST00000590556 THADAQ6YHU6 1953 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3DA0A087WVF3 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3IA0A087WXS9 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3EA0A087X179 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 TBC1D3KA0A087X1G2 549 aa19.3■□□□□ 0.68
DDX39A-214ENST00000590556 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms