RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SERPINB6P35237 376 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 MAGEA1P43355 309 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 CSNK1DP48730 415 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 RENBPP51606 427 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 TAS2R40P59535 323 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 BNIP3Q12983 259 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 LBRQ14739 615 aaKnown RBP12.22□□□□□ -0.45
TPM4-212ENST00000590180 GRM3Q14832 879 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 PDK2Q15119 407 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 CXorf40AQ8TE69 158 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 ZNF641Q96N77 438 aaPredicted RBP12.22□□□□□ -0.45
TPM4-212ENST00000590180 CDC6Q99741 560 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 KLHL11Q9NVR0 708 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 DKK3Q9UBP4 350 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 SEPT3Q9UH03 358 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 ITM2BQ9Y287 266 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 BTBD3Q9Y2F9 522 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 ACACBO00763 2458 aa12.22□□□□□ -0.45
TPM4-212ENST00000590180 FPGTO14772 594 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 CBFA2T3O75081 653 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
TPM4-212ENST00000590180 TNNT1P13805 278 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 GRK6P43250 576 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 NOP2P46087 812 aaKnown RBP12.21□□□□□ -0.45
TPM4-212ENST00000590180 RGRP47804 291 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ZNF75DP51815 510 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 BCL2L1Q07817 233 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 NSUN2Q08J23 767 aaKnown RBP eCLIP12.21□□□□□ -0.45
TPM4-212ENST00000590180 SLC10A7Q0GE19 358 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 FGL2Q14314 439 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ZNF235Q14590 738 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 CCDC157Q569K6 752 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TMCO4Q5TGY1 634 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 Q6ZSR6 202 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 RHOT2Q8IXI1 618 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 BBS5Q8N3I7 341 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 OXR1Q8N573 874 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ATPAF2Q8N5M1 289 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TC2NQ8N9U0 490 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TMEM145Q8NBT3 493 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 OR13H1Q8NG92 308 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 HCAR2Q8TDS4 363 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TSC1Q92574 1164 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 VOPP1Q96AW1 172 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ZNF599Q96NL3 588 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 TUBGCP5Q96RT8 1024 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 WRAP53Q9BUR4 548 aaKnown RBP12.21□□□□□ -0.45
TPM4-212ENST00000590180 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 ERVMER34-1Q9H9K5 563 aa12.21□□□□□ -0.45
TPM4-212ENST00000590180 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.45
TPM4-212ENST00000590180 APOBEC2Q9Y235 224 aaKnown RBP12.21□□□□□ -0.45
TPM4-212ENST00000590180 PLXNA2O75051 1894 aa12.21□□□□□ -0.46
TPM4-212ENST00000590180 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
TPM4-212ENST00000590180 AREL1O15033 823 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 RAD51BO15315 384 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 YKT6O15498 198 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 MAFKO60675 156 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 TM7SF2O76062 418 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SPINK2P20155 84 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 KDELR1P24390 212 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SERPINA4P29622 427 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 MAN1A1P33908 653 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ARHGAP25P42331 645 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 RXRGP48443 463 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SUOXP51687 545 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ARSEP51690 589 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SEMG2Q02383 582 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ITKQ08881 620 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ELP6Q0PNE2 266 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SHBQ15464 509 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 UGP2Q16851 508 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ODF2Q5BJF6 829 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ANKRD20A8PQ5CZ79 823 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 MARC1Q5VT66 337 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 ERAP2Q6P179 960 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 PTAR1Q7Z6K3 402 aaPredicted RBP12.2□□□□□ -0.46
TPM4-212ENST00000590180 ZSCAN30Q86W11 494 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 CHCHD4Q8N4Q1 142 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 EID2Q8N6I1 236 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 PNPLA1Q8N8W4 532 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 PCDH19Q8TAB3 1148 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 FAM174AQ8TBP5 190 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 FAM71BQ8TC56 605 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 SAP25Q8TEE9 199 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 BMFQ96LC9 184 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 CNTNAP3BQ96NU0 1288 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 PSKH2Q96QS6 385 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
TPM4-212ENST00000590180 CNTNAP3Q9BZ76 1288 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 PCDH12Q9NPG4 1184 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 INTUQ9ULD6 942 aa12.2□□□□□ -0.46
TPM4-212ENST00000590180 NYNRINQ9P2P1 1898 aaKnown RBP12.2□□□□□ -0.46
TPM4-212ENST00000590180 CHD8Q9HCK8 2581 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms