RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PDFQ9HBH1 243 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 TMEM63CQ9P1W3 806 aa18.24■□□□□ 0.51
H3F3B-209ENST00000589949 ZSCAN5CA6NGD5 496 aaPredicted RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 TMCO5BA8MYB1 307 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 GCATO75600 419 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 PIGNO95427 931 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 FERP16591 822 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 EIF2S3P41091 472 aaKnown RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 YBEYP58557 167 aaPredicted RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 RHOAP61586 193 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 E2F1Q01094 437 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 CYP4V2Q6ZWL3 525 aaPredicted RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 ZSWIM9Q86XI8 627 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 CELF6Q96J87 481 aaKnown RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 EPAS1Q99814 870 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 WRAP53Q9BUR4 548 aaKnown RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 RTN4Q9NQC3 1192 aaKnown RBP18.23■□□□□ 0.51
H3F3B-209ENST00000589949 ASXL3Q9C0F0 2248 aa18.23■□□□□ 0.51
H3F3B-209ENST00000589949 COL27A1Q8IZC6 1860 aaPredicted RBP18.22■□□□□ 0.51
H3F3B-209ENST00000589949 BAHCC1Q9P281 2608 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 BUB1BO60566 1050 aaPredicted RBP18.22■□□□□ 0.51
H3F3B-209ENST00000589949 JUNDP17535 347 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 RGRP47804 291 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 DEFB133Q30KQ1 61 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 PARP15Q460N3 678 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 CCDC183Q5T5S1 534 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 PLEKHA7Q6IQ23 1121 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 DCUN1D2Q6PH85 259 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 TP53I13Q8NBR0 393 aaPredicted RBP18.22■□□□□ 0.51
H3F3B-209ENST00000589949 DENND6BQ8NEG7 585 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 CASKIN2Q8WXE0 1202 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 SLC39A8Q9C0K1 460 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 DKK3Q9UBP4 350 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 COQ6Q9Y2Z9 468 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 RAI2Q9Y5P3 530 aa18.22■□□□□ 0.51
H3F3B-209ENST00000589949 NEMP2A6NFY4 417 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 LRRC53A6NM62 1247 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 AQP9O43315 295 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 IGSF6O95976 241 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 TNFAIP3P21580 790 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 C1orf61Q13536 156 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 CDKN3Q16667 212 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 KLHL40Q2TBA0 621 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 ANO6Q4KMQ2 910 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 GUSBP11Q6P575 273 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 ZSCAN30Q86W11 494 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 LMX1AQ8TE12 382 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 NSMCE3Q96MG7 304 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 CPEB1Q9BZB8 566 aaKnown RBP18.21■□□□□ 0.51
H3F3B-209ENST00000589949 CLPBQ9H078 707 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 CATSPERBQ9H7T0 1116 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 IPO11Q9UI26 975 aaKnown RBP18.21■□□□□ 0.51
H3F3B-209ENST00000589949 CSNK1G3Q9Y6M4 447 aa18.21■□□□□ 0.51
H3F3B-209ENST00000589949 A0A1W2PNU3 283 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ANKRD62A6NC57 917 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 TMEM191CA6NGB0 347 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 PRAMEF11O60813 436 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 PRKCGP05129 697 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 CELA2BP08218 269 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ALPPL2P10696 532 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 TGM2P21980 687 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 AIF1P55008 147 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 TPI1P60174 286 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 IRF4Q15306 451 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 TMEM52BQ4KMG9 183 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 HS1BP3Q53T59 392 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 AFMIDQ63HM1 303 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 KCTD16Q68DU8 428 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ARHGAP36Q6ZRI8 547 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ZNF571Q7Z3V5 609 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ARHGAP12Q8IWW6 846 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 TP53INP2Q8IXH6 220 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 NPWQ8N729 165 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 SNIP1Q8TAD8 396 aaKnown RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 IFI44Q8TCB0 444 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 ARHGEF26Q96DR7 871 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 VCPIP1Q96JH7 1222 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 NAP1L5Q96NT1 182 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 KCTD15Q96SI1 283 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 SNRNP25Q9BV90 132 aaKnown RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 DUSP23Q9BVJ7 150 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 UBA2Q9UBT2 640 aaPredicted RBP18.2■□□□□ 0.5
H3F3B-209ENST00000589949 PCSK1NQ9UHG2 260 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 AP4E1Q9UPM8 1137 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 LRRK1Q38SD2 2015 aa18.2■□□□□ 0.5
H3F3B-209ENST00000589949 SMG1Q96Q15 3661 aaKnown RBP18.19■□□□□ 0.5
H3F3B-209ENST00000589949 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 DDX3XO00571 662 aaKnown RBP eCLIP18.19■□□□□ 0.57e-14■■■□□ 17.1
H3F3B-209ENST00000589949 FGF10O15520 208 aaPredicted RBP18.19■□□□□ 0.5
H3F3B-209ENST00000589949 TM7SF2O76062 418 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 MPOP05164 745 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 GP1BAP07359 652 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 PSMA2P25787 234 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 ABCG1P45844 678 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 WSCD2Q2TBF2 565 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 PRRT3Q5FWE3 981 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 ZCCHC8Q6NZY4 707 aaKnown RBP18.19■□□□□ 0.5
H3F3B-209ENST00000589949 CAMK1DQ8IU85 385 aa18.19■□□□□ 0.5
H3F3B-209ENST00000589949 PHACTR4Q8IZ21 702 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms