RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZNF276Q8N554 614 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 UBR7Q8N806 425 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 SNX19Q92543 992 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 PRCCQ92733 491 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-219ENST00000589349 ZC3H10Q96K80 434 aaKnown RBP8.51□□□□□ -1.05
DNMT1-219ENST00000589349 PPP1R13BQ96KQ4 1090 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 ZSWIM1Q9BR11 485 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 EDEM2Q9BV94 578 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
DNMT1-219ENST00000589349 VPS16Q9H269 839 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 NDST4Q9H3R1 872 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 PLCB1Q9NQ66 1216 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 ABCB8Q9NUT2 735 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 ELOVL2Q9NXB9 296 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 TAB2Q9NYJ8 693 aa8.51□□□□□ -1.05
DNMT1-219ENST00000589349 MBD1Q9UIS9 605 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-219ENST00000589349 USP34Q70CQ2 3546 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 GPR179Q6PRD1 2367 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 TRAV20A0A0B4J274 112 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 MED19A0JLT2 244 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 BCLAF3A2AJT9 711 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 C4orf47A7E2U8 309 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 PATE3B3GLJ2 98 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 FOXN3O00409 490 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 TIMM44O43615 452 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ACSL4O60488 711 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 PENKP01210 267 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ATP5BP06576 529 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 CISD3P0C7P0 127 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 PNMA6AP0CW24 399 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 HLA-EP13747 358 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ABCB4P21439 1286 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 TGM1P22735 817 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 IL12RB1P42701 662 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 PTGER3P43115 390 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 GPD2P43304 727 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF132P52740 706 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 BPIFB4P59827 614 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 YWHAZP63104 245 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF234Q14588 700 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 TRIM61Q5EBN2 209 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SLC35F1Q5T1Q4 408 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SYCP2LQ5T4T6 812 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 DAB2IPQ5VWQ8 1189 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 PMS2CLQ68D20 193 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SLC47A2Q86VL8 602 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 TMPRSS6Q8IU80 811 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 LGI2Q8N0V4 545 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 CPXM2Q8N436 756 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ZNF366Q8N895 744 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 ATP6V0D2Q8N8Y2 350 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 HJURPQ8NCD3 748 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 C1orf131Q8NDD1 294 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 DQX1Q8TE96 717 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SIPA1Q96FS4 1042 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 C1orf159Q96HA4 380 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SPATA9Q9BWV2 254 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SLC2A11Q9BYW1 496 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 SEPT11Q9NVA2 429 aaKnown RBP8.5□□□□□ -1.05
DNMT1-219ENST00000589349 DDIT4Q9NX09 232 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 GGA2Q9UJY4 613 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 CLEC4EQ9ULY5 219 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 NFE2L3Q9Y4A8 694 aa8.5□□□□□ -1.05
DNMT1-219ENST00000589349 A0A1W2PQF6 199 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 F5H5T6 163 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 GOLGA8SH3BPF8 625 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SLC30A4O14863 429 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 MOCS3O95396 460 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 TRUB2O95900 331 aaKnown RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 FUCA1P04066 466 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 PABPC1P11940 636 aaKnown RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 GNSP15586 552 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 HOXD9P28356 352 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 P2RY2P41231 377 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 RPS24P62847 133 aaKnown RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 IRX4P78413 519 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 GFPT1Q06210 699 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 PDCLQ13371 301 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 DRAP1Q14919 205 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 EIF4HQ15056 248 aaKnown RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SYCP1Q15431 976 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 FUT11Q495W5 492 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 EFHC1Q5JVL4 640 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 SYPL2Q5VXT5 272 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 RAP1GAP2Q684P5 730 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 C11orf57Q6ZUT1 292 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-219ENST00000589349 BHLHA9Q7RTU4 235 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 TAC4Q86UU9 113 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 DEFB106AQ8N104 65 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 AHI1Q8N157 1196 aa8.49□□□□□ -1.05
DNMT1-219ENST00000589349 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms