RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 PAMP19021 973 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 GNGT1P63211 74 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 NHLH1Q02575 133 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 DNAJC3Q13217 504 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 IHHQ14623 411 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 POU6F1Q14863 301 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 PDPK2PQ6A1A2 396 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 NLRP9Q7RTR0 991 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 C12orf76Q8N812 135 aaPredicted RBP12.19□□□□□ -0.46
CCBE1-203ENST00000589116 ITFG1Q8TB96 612 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 IRF7Q92985 503 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 BHMTQ93088 406 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 MFSD3Q96ES6 412 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 LMLNQ96KR4 655 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 ZSWIM3Q96MP5 696 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 FCRL3Q96P31 734 aaPredicted RBP12.19□□□□□ -0.46
CCBE1-203ENST00000589116 PPANQ9NQ55 473 aaKnown RBP12.19□□□□□ -0.46
CCBE1-203ENST00000589116 CHRAC1Q9NRG0 131 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 PLK2Q9NYY3 685 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 LHX3Q9UBR4 397 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 ACTL7AQ9Y615 435 aa12.19□□□□□ -0.46
CCBE1-203ENST00000589116 PAPSS2O95340 614 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-203ENST00000589116 NDST3O95803 873 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 ALADP13716 330 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 CA4P22748 312 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 NMBRP28336 390 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 CHRNA4P43681 627 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 RGRP47804 291 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 SCNN1BP51168 640 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 RHOAP61586 193 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 GUCY1A3Q02108 690 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 MSLNQ13421 630 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-203ENST00000589116 DMC1Q14565 340 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 SIRPB2Q5JXA9 342 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 KIAA0930Q6ICG6 404 aaPredicted RBP12.18□□□□□ -0.46
CCBE1-203ENST00000589116 CES3Q6UWW8 571 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 LINGO4Q6UY18 593 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 GPR149Q86SP6 731 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 KCNMB4Q86W47 210 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 APCDD1Q8J025 514 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 SLC25A41Q8N5S1 370 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 PEX13Q92968 403 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 TRIB3Q96RU7 358 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 CPNE1Q99829 537 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 SLC2A11Q9BYW1 496 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 NSUN3Q9H649 340 aaKnown RBP12.18□□□□□ -0.46
CCBE1-203ENST00000589116 NOD2Q9HC29 1040 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 TREX1Q9NSU2 369 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 INTS9Q9NV88 658 aaKnown RBP12.18□□□□□ -0.46
CCBE1-203ENST00000589116 NKIRAS1Q9NYS0 192 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 TXNDC16Q9P2K2 825 aa12.18□□□□□ -0.46
CCBE1-203ENST00000589116 FAM47DPA6NHR8 397 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 MT-ND3P03897 115 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 CREB1P16220 341 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 FSHRP23945 695 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 CD70P32970 193 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 LSP1P33241 339 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 GP5P40197 560 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 MAPK8P45983 427 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 NUMBP49757 651 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 AP1S1P61966 158 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 PITRM1Q5JRX3 1037 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 RARS2Q5T160 578 aaKnown RBP12.17□□□□□ -0.46
CCBE1-203ENST00000589116 PACS1Q6VY07 963 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 KDELC2Q7Z4H8 507 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 TMEM25Q86YD3 366 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 NPAS3Q8IXF0 933 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 UNC5BQ8IZJ1 945 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 EFHBQ8N7U6 833 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-203ENST00000589116 SGSM3Q96HU1 749 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 TDRD1Q9BXT4 1180 aaKnown RBP12.17□□□□□ -0.46
CCBE1-203ENST00000589116 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 C20orf96Q9NUD7 363 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-203ENST00000589116 OBP2AQ9NY56 170 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.17□□□□□ -0.46
CCBE1-203ENST00000589116 RIMKLBQ9ULI2 386 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 CLEC4EQ9ULY5 219 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 ANKRD36A6QL64 1941 aa12.17□□□□□ -0.46
CCBE1-203ENST00000589116 A0A1W2PPM1 405 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
CCBE1-203ENST00000589116 FOXO6A8MYZ6 492 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 TRIM49D1C9J1S8 452 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 GJB3O75712 270 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 GLP2RO95838 553 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 ERVK-10P10266 1014 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 TYRP14679 529 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 KRT4P19013 534 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 HLA-FP30511 346 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 CSNK1DP48730 415 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 CSE1LP55060 971 aaKnown RBP12.16□□□□□ -0.46
CCBE1-203ENST00000589116 SULT2A1Q06520 285 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 SEPT6Q14141 434 aa12.16□□□□□ -0.46
CCBE1-203ENST00000589116 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms