RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TPCN2Q8NHX9 752 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 JOSD2Q8TAC2 188 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 SLC20A1Q8WUM9 679 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 CENPIQ92674 756 aaPredicted RBP18.67■□□□□ 0.58
CCDC43-204ENST00000588687 IL12RB2Q99665 862 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 MAGEH1Q9H213 219 aa18.67■□□□□ 0.58
CCDC43-204ENST00000588687 IPO11Q9UI26 975 aaKnown RBP18.67■□□□□ 0.58
CCDC43-204ENST00000588687 TLN1Q9Y490 2541 aaKnown RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CAPN8A6NHC0 703 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 TMCC1O94876 653 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 GJB6O95452 261 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CYP1A1P04798 512 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 PRKCSHP14314 528 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 TSHRP16473 764 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CHRNB2P17787 502 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 ITIH2P19823 946 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 MLLT3P42568 568 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 PTPN9P43378 593 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 GEMIN4P57678 1058 aaKnown RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 SNRPD1P62314 119 aaKnown RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 YPEL5P62699 121 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 PTP4A2Q12974 167 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CLN3Q13286 438 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CDO1Q16878 200 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 HSP90AA4PQ58FG1 418 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 NYAP1Q6ZVC0 841 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 VPS36Q86VN1 386 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 RYBPQ8N488 228 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-204ENST00000588687 GPT2Q8TD30 523 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 RXFP2Q8WXD0 754 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 NAT6Q93015 286 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 EPAS1Q99814 870 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 CCDC3Q9BQI4 270 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 KLC2Q9H0B6 622 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 GANQ9H2C0 597 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 RABGEF1Q9UJ41 708 aa18.66■□□□□ 0.58
CCDC43-204ENST00000588687 ANKRD36A6QL64 1941 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 J3QKU1 62 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 NEMP1O14524 444 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 YY2O15391 372 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 MMP20O60882 483 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 RAMP2O60895 175 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 POP4O95707 220 aaKnown RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 RBMS1P29558 406 aaKnown RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 THOP1P52888 689 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 ADKP55263 362 aaKnown RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 FMO1Q01740 532 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 PTK2BQ14289 1009 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 POLD3Q15054 466 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 IRF4Q15306 451 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 RWDD4Q6NW29 188 aaKnown RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 GDPD4Q6W3E5 623 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 STRADAQ7RTN6 431 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 B3GNT8Q7Z7M8 397 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 FAM114A1Q8IWE2 563 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 MSANTD4Q8NCY6 345 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 WDR36Q8NI36 951 aaKnown RBP18.65■□□□□ 0.58
CCDC43-204ENST00000588687 TBC1D31Q96DN5 1066 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 STK33Q9BYT3 514 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 DKK3Q9UBP4 350 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 MFHAS1Q9Y4C4 1052 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 COL12A1Q99715 3063 aa18.65■□□□□ 0.58
CCDC43-204ENST00000588687 TOR1BO14657 336 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 KDELR3O43731 214 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 ITGA2BP08514 1039 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 C6P13671 934 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 EIF4A3P38919 411 aaKnown RBP18.64■□□□□ 0.57
CCDC43-204ENST00000588687 GSCP56915 257 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-204ENST00000588687 UBE2HP62256 183 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 KIAA1614Q5VZ46 1190 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 KCTD16Q68DU8 428 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 KYQ8NBH2 561 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 NETO2Q8NC67 525 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 WDR48Q8TAF3 677 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 NTAN1Q96AB6 310 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 LIN37Q96GY3 246 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-204ENST00000588687 GDAP1L1Q96MZ0 367 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 TTYH3Q9C0H2 523 aa18.64■□□□□ 0.57
CCDC43-204ENST00000588687 CCDC187A0A096LP49 1063 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 TM7SF2O76062 418 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
CCDC43-204ENST00000588687 TIMP2P16035 220 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 SDC4P31431 198 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 RPIAP49247 311 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 CDR2Q01850 454 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 ALG11Q2TAA5 492 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 ARL13BQ3SXY8 428 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 ZNF677Q86XU0 584 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 ARL10Q8N8L6 244 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 PCDH19Q8TAB3 1148 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 C11orf70Q9BRQ4 267 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 SLC13A1Q9BZW2 595 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 LHX3Q9UBR4 397 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 PADI4Q9UM07 663 aa18.63■□□□□ 0.57
CCDC43-204ENST00000588687 TSPAN11A1L157 253 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 ZSCAN5CA6NGD5 496 aaPredicted RBP18.62■□□□□ 0.57
CCDC43-204ENST00000588687 B8ZZF3 427 aa18.62■□□□□ 0.57
CCDC43-204ENST00000588687 D6RAR5 112 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms