RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 BNIP3LO60238 219 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 SASH3O75995 380 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 PIGNO95427 931 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 APODP05090 189 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CTHP32929 405 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 GRIA2P42262 883 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CCNHP51946 323 aaPredicted RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 GPX6P59796 221 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 AP1S1P61966 158 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 SNRPD1P62314 119 aaKnown RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 CDK18Q07002 472 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CDH17Q12864 832 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 GALNT3Q14435 633 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CARD16Q5EG05 197 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 DNAJC21Q5F1R6 531 aaKnown RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 RALGPS1Q5JS13 557 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 SIRPB2Q5JXA9 342 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CERCAMQ5T4B2 595 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 DPY19L3Q6ZPD9 716 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 TRMT10CQ7L0Y3 403 aaKnown RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 DNAAF3Q8N9W5 541 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 CHST14Q8NCH0 376 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 OR2A12Q8NGT7 310 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 UHMK1Q8TAS1 419 aaKnown RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 DNASE1L2Q92874 299 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 ZBTB9Q96C00 473 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 FEM1CQ96JP0 617 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 PHF12Q96QT6 1004 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 P2RY13Q9BPV8 354 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 PLAC1Q9HBJ0 212 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 HECAQ9UBI9 543 aaPredicted RBP11.42□□□□□ -0.58
VMP1-207ENST00000588131 CHKBQ9Y259 395 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 PIAS3Q9Y6X2 628 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 ANKRD36A6QL64 1941 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 C5orf42Q9H799 3197 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 SDR42E2A6NKP2 422 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 TIMM44O43615 452 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 FZD6O60353 706 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 ACSL3O95573 720 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 TTC4O95801 387 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 CPP00450 1065 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 PRLP01236 227 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 PDHA1P08559 390 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 HLA-EP13747 358 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 NNMTP40261 264 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 NPY2RP49146 381 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 ST8SIA6P61647 398 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 MSLNQ13421 630 aaPredicted RBP11.41□□□□□ -0.58
VMP1-207ENST00000588131 ZNF234Q14588 700 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 SLC1A5Q15758 541 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 MYLK3Q32MK0 819 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 CCDC38Q502W7 563 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 FNDC3BQ53EP0 1204 aaKnown RBP11.41□□□□□ -0.58
VMP1-207ENST00000588131 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 EMC10Q5UCC4 262 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 EGFLAMQ63HQ2 1017 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 DENND2CQ68D51 928 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 HDXQ7Z353 690 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 CAMK1DQ8IU85 385 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 PYROXD1Q8WU10 500 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 STAMBPL1Q96FJ0 436 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 SMIM14Q96QK8 99 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 ACOX2Q99424 681 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 EBNA1BP2Q99848 306 aaKnown RBP11.41□□□□□ -0.58
VMP1-207ENST00000588131 PABPC3Q9H361 631 aaKnown RBP11.41□□□□□ -0.58
VMP1-207ENST00000588131 ARNT2Q9HBZ2 717 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 LRRC4CQ9HCJ2 640 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 MAD1L1Q9Y6D9 718 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 XIRP2A4UGR9 3374 aa11.41□□□□□ -0.58
VMP1-207ENST00000588131 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.4□□□□□ -0.58
VMP1-207ENST00000588131 SHISA7A6NL88 538 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 WASH3PC4AMC7 463 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 K7EQS6 105 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 TRAFD1O14545 582 aaPredicted RBP11.4□□□□□ -0.58
VMP1-207ENST00000588131 MAP2K7O14733 419 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 NDST3O95803 873 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 EGFP01133 1207 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 EPOP01588 193 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 SHBGP04278 402 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 PRKCGP05129 697 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
VMP1-207ENST00000588131 HLA-DPA1P20036 260 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 PRKCHP24723 683 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 SSTR1P30872 391 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 IL12RB1P42701 662 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 MAPK8P45983 427 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 BCL2L1Q07817 233 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 TDGQ13569 410 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 SLC29A2Q14542 456 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 POU6F1Q14863 301 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 PON2Q15165 354 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 PTPRRQ15256 657 aa11.4□□□□□ -0.58
VMP1-207ENST00000588131 PREPLQ4J6C6 727 aaPredicted RBP11.4□□□□□ -0.58
VMP1-207ENST00000588131 FSTL4Q6MZW2 842 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms