RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 ZBTB16Q05516 673 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 BCL2L1Q07817 233 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 CNTN1Q12860 1018 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 GRM3Q14832 879 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 P3H1Q32P28 736 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 MAP7D1Q3KQU3 841 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF805Q5CZA5 627 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 RALGPS1Q5JS13 557 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 LRRC73Q5JTD7 316 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FAXCQ5TGI0 409 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM46CQ5VWP2 391 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 PARS2Q7L3T8 475 aaKnown RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM124AQ86V42 546 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 WDR5BQ86VZ2 330 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 KLHL7Q8IXQ5 586 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 HDDC3Q8N4P3 179 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 TAB3Q8N5C8 712 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 NELL1Q92832 810 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 OXNAD1Q96HP4 312 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FCRL5Q96RD9 977 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 OSBPL1AQ9BXW6 950 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 NEUROG2Q9H2A3 272 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 ATP13A3Q9H7F0 1226 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 RSPH14Q9UHP6 348 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 CYP8B1Q9UNU6 501 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 RAI2Q9Y5P3 530 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 MRFAP1Q9Y605 127 aa10.81□□□□□ -0.68
SMARCA4-213ENST00000587988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 TSPAN11A1L157 253 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 FZD6O60353 706 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 RNASEH2AO75792 299 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 STK10O94804 968 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PRLP01236 227 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PRKCGP05129 697 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PDHA1P08559 390 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SERPINF2P08697 491 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 TIMP2P16035 220 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ITGB7P26010 798 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SERPINA4P29622 427 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 RPL22P35268 128 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 P2RY2P41231 377 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ABL2P42684 1182 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 FNTAP49354 379 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 NUBP1P53384 320 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 C2orf54Q08AI8 447 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SRSF5Q13243 272 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 NUMA1Q14980 2115 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 TRIP13Q15645 432 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PCSK7Q16549 785 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 TTC31Q49AM3 519 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PIP5KL1Q5T9C9 394 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 AGBL4Q5VU57 503 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ITPRIPL1Q6GPH6 555 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 KDELC1Q6UW63 502 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ARHGEF18Q6ZSZ5 1173 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ERN2Q76MJ5 926 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 GSTA5Q7RTV2 222 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 KDELC2Q7Z4H8 507 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 LONP2Q86WA8 852 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 CCDC89Q8N998 374 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SPATA4Q8NEY3 305 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 GANCQ8TET4 914 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 PDCD6IPQ8WUM4 868 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM131CQ96AQ9 280 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ECHDC3Q96DC8 303 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 MRGPRX2Q96LB1 330 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF641Q96N77 438 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SMIM14Q96QK8 99 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 OMDQ99983 421 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 MLPHQ9BV36 600 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 TDRD1Q9BXT4 1180 aaKnown RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 HAUS2Q9NVX0 235 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 FAM153AQ9UHL3 310 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 MBD1Q9UIS9 605 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 SCML1Q9UN30 329 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 CHKBQ9Y259 395 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 NEU2Q9Y3R4 380 aa10.8□□□□□ -0.68
SMARCA4-213ENST00000587988 IGHV1OR15-9A0A0B4J2B8 117 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 CCDC163A0A0D9SF12 145 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 CCDC188H7C350 402 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 SPINT1O43278 529 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 HRO43593 1189 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 SOCS5O75159 536 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF217O75362 1048 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PMPCBO75439 489 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ZNF189O75820 626 aaPredicted RBP10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PGLSO95336 258 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 KRT14P02533 472 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ADRB3P13945 408 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 BCKDHBP21953 392 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 ACSL1P33121 698 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 PTGIRP43119 386 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 WNT3AP56704 352 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 TAS2R38P59533 333 aa10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 MRPS25P82663 173 aaKnown RBP10.79□□□□□ -0.68
SMARCA4-213ENST00000587988 SEMG2Q02383 582 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms