RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LRRK1Q38SD2 2015 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 ZSCAN5CA6NGD5 496 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 FAM72CH0Y354 149 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 K7ENP7 123 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 MMP20O60882 483 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 RAMP2O60895 175 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 LRIG2O94898 1065 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 TSHRP16473 764 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 SDC4P31431 198 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 IGFALSP35858 605 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 EIF4A3P38919 411 aaKnown RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 UBE2HP62256 183 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 PPARDQ03181 441 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 RAD51Q06609 339 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CDO1Q16878 200 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 C15orf59Q2T9L4 293 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 FAXCQ5TGI0 409 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 FAM72AQ5TYM5 149 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 FAM72DQ6L9T8 149 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 ESRP1Q6NXG1 681 aaKnown RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 INO80CQ6PI98 192 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 MACC1Q6ZN28 852 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 STRADAQ7RTN6 431 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CLEC14AQ86T13 490 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 FAM72BQ86X60 149 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 ZNF677Q86XU0 584 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 EPS8L1Q8TE68 723 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CXorf40AQ8TE69 158 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CENPIQ92674 756 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-213ENST00000587604 TBC1D31Q96DN5 1066 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 LRRC61Q9BV99 259 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 SEMA4CQ9C0C4 833 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CLPBQ9H078 707 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 PADI4Q9UM07 663 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 NEU3Q9UQ49 428 aa14.24□□□□□ -0.13
DNMT1-213ENST00000587604 CCDC187A0A096LP49 1063 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 C2CD4BA6NLJ0 364 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 B8ZZF3 427 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 F8VZ95 297 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 BUB1O43683 1085 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 TNFSF15O95150 251 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 PLEKP08567 350 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 C6P13671 934 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 MMP8P22894 467 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 ERCC5P28715 1186 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 PTPN9P43378 593 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 BLKP51451 505 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 SPIDRQ14159 915 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 LY6DQ14210 128 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 INO80DQ53TQ3 878 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 ATXN7L2Q5T6C5 722 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 FOXR1Q6PIV2 292 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 LVRNQ6Q4G3 990 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 LEKR1Q6ZMV7 388 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 FSTL5Q8N475 847 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 TP53I13Q8NBR0 393 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 GPT2Q8TD30 523 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 SCG3Q8WXD2 468 aaKnown RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 CASKIN2Q8WXE0 1202 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 GDAP1L1Q96MZ0 367 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 EPAS1Q99814 870 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 CCDC3Q9BQI4 270 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 MAGEB5Q9BZ81 275 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 TTYH3Q9C0H2 523 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 MBNL1Q9NR56 388 aaKnown RBP14.23□□□□□ -0.13
DNMT1-213ENST00000587604 DKK3Q9UBP4 350 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
DNMT1-213ENST00000587604 PMS2P1A4D2B8 440 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 TMEM110-MUSTN1A8MSY1 372 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 NTN3O00634 580 aaPredicted RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CASC3O15234 703 aaKnown RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 TMCC1O94876 653 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CYP1A1P04798 512 aaPredicted RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 TIMP2P16035 220 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 ITIH2P19823 946 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 PEX5P50542 639 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 SUOXP51687 545 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 PDX1P52945 283 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 HDAC4P56524 1084 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CDR2Q01850 454 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CLN3Q13286 438 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 ELOCQ15369 112 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 KLHL40Q2TBA0 621 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 HSP90AA4PQ58FG1 418 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 LRRC73Q5JTD7 316 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CCDC81Q6ZN84 652 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 SDR16C5Q8N3Y7 309 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 ARL10Q8N8L6 244 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 COL26A1Q96A83 441 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 MED8Q96G25 268 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 CPEB1Q9BZB8 566 aaKnown RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 GULP1Q9UBP9 304 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 NOCTQ9UK39 431 aaKnown RBP14.22□□□□□ -0.13
DNMT1-213ENST00000587604 DOLKQ9UPQ8 538 aa14.22□□□□□ -0.13
DNMT1-213ENST00000587604 TMX2-CTNND1H3BSU7 103 aa14.21□□□□□ -0.13
DNMT1-213ENST00000587604 IGSF6O95976 241 aa14.21□□□□□ -0.13
DNMT1-213ENST00000587604 ALPIP09923 528 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms