RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CDK17Q00537 523 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 PPARDQ03181 441 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 KCNAB2Q13303 367 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 TAF5Q15542 800 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 TCP11X2Q5H9J9 407 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 CDKAL1Q5VV42 579 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 HIST2H2BCQ6DN03 193 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 DENND1BQ6P3S1 775 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 SARM1Q6SZW1 724 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 VPS36Q86VN1 386 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 Q8N9G6 341 aaPredicted RBP8.7□□□□□ -1.02
SDF2-204ENST00000587338 DCAF4L2Q8NA75 395 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 SCG3Q8WXD2 468 aaKnown RBP8.7□□□□□ -1.02
SDF2-204ENST00000587338 USP7Q93009 1102 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 NT5C1BQ96P26 610 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 LENG8Q96PV6 779 aaPredicted RBP8.7□□□□□ -1.02
SDF2-204ENST00000587338 C1QTNF2Q9BXJ5 285 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 HSD3B7Q9H2F3 369 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 ITM2BQ9Y287 266 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 TBC1D30Q9Y2I9 924 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 HS3ST4Q9Y661 456 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 ABCA12Q86UK0 2595 aa8.7□□□□□ -1.02
SDF2-204ENST00000587338 ZFC3H1O60293 1989 aaKnown RBP8.7□□□□□ -1.02
SDF2-204ENST00000587338 UNC13CQ8NB66 2214 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 CRYBG3Q68DQ2 2970 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 A0A0D9SEW6 157 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 CLEC18AA5D8T8 446 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 C9orf172C9J069 976 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 SLC16A3O15427 465 aaKnown RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 TSPAN6O43657 245 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 AP1G1O43747 822 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 GNA14O95837 355 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 EEF1GP26641 437 aaKnown RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 L1CAMP32004 1257 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 IGFALSP35858 605 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 CDH4P55283 916 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 NME3Q13232 169 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 EIF4EBP2Q13542 120 aaPredicted RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 KRT31Q15323 416 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 ELOCQ15369 112 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 CLEC18BQ6UXF7 455 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 MACC1Q6ZN28 852 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 TFAP2DQ7Z6R9 452 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 ZSCAN30Q86W11 494 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 CCNJLQ8IV13 435 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 FSTL5Q8N475 847 aaPredicted RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 CLEC18CQ8NCF0 446 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 DENND6BQ8NEG7 585 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 TBATAQ96M53 351 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 NAP1L5Q96NT1 182 aaPredicted RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 TUBGCP2Q9BSJ2 902 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 LRRN3Q9H3W5 708 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 ZDHHC6Q9H6R6 413 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 LRRC4CQ9HCJ2 640 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 LIMA1Q9UHB6 759 aaKnown RBP8.69□□□□□ -1.02
SDF2-204ENST00000587338 GPR34Q9UPC5 381 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 CELSR2Q9HCU4 2923 aa8.69□□□□□ -1.02
SDF2-204ENST00000587338 SCN8AQ9UQD0 1980 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 A0A1W2PQC6 194 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 GOLGA6L6A8MZA4 724 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 PAGE1O75459 146 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 GRAP2O75791 330 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 ALPIP09923 528 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 CTSEP14091 401 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 CD82P27701 267 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
SDF2-204ENST00000587338 ABL2P42684 1182 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 CCNHP51946 323 aaPredicted RBP8.68□□□□□ -1.02
SDF2-204ENST00000587338 UBXN1Q04323 297 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 ALFQ53S48 1182 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 PHF19Q5T6S3 580 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 FOXR2Q6PJQ5 311 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 RRAGAQ7L523 313 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 RD3Q7Z3Z2 195 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 DTX1Q86Y01 620 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 IRF2BP1Q8IU81 584 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 HID1Q8IV36 788 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 DEFB106AQ8N104 65 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 RYBPQ8N488 228 aaPredicted RBP8.68□□□□□ -1.02
SDF2-204ENST00000587338 OR7D4Q8NG98 312 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 OR6K2Q8NGY2 324 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 STK32AQ8WU08 396 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 TMEM159Q96B96 161 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 SLC2A13Q96QE2 648 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 CMKLR1Q99788 373 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 HEPHQ9BQS7 1158 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 SPON2Q9BUD6 331 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 SLC12A9Q9BXP2 914 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 SLC4A5Q9BY07 1137 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
SDF2-204ENST00000587338 ZNF71Q9NQZ8 489 aaPredicted RBP8.68□□□□□ -1.02
SDF2-204ENST00000587338 ARMCX3Q9UH62 379 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms