RNA–Protein interactions for RNA: ENST00000587204.1

TUBB6-206, Transcript of tubulin beta 6 class V, humanhuman

TSL 2

Gene TUBB6, Length 408 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-206ENST00000587204 CYTH1Q15438 398 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 DEFB133Q30KQ1 61 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 LMX1AQ8TE12 382 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 CXorf40AQ8TE69 158 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 PEBP4Q96S96 227 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 OSBPL1AQ9BXW6 950 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 RETREG1Q9H6L5 497 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 RTN4Q9NQC3 1192 aaKnown RBP14.36□□□□□ -0.11
TUBB6-206ENST00000587204 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
TUBB6-206ENST00000587204 GPR27Q9NS67 375 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 NLGN3Q9NZ94 848 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 UBA2Q9UBT2 640 aaPredicted RBP14.36□□□□□ -0.11
TUBB6-206ENST00000587204 AP4E1Q9UPM8 1137 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 COQ6Q9Y2Z9 468 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 PCDHB1Q9Y5F3 818 aa14.36□□□□□ -0.11
TUBB6-206ENST00000587204 ITPR1Q14643 2758 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 LY6G6EA0A0G2JKS1 128 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 EEF2KO00418 725 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 AREL1O15033 823 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 SCAMP1O15126 338 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 FGF10O15520 208 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 BRINP1O60477 761 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CSF2P04141 144 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CKMT1AP12532 417 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 NME1P15531 152 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 ITPKBP27987 946 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 THOP1P52888 689 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 C1orf61Q13536 156 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 COL9A2Q14055 689 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CDKN3Q16667 212 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 PARP15Q460N3 678 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CRTC1Q6UUV9 634 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 DCP2Q8IU60 420 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 UMODL1-AS1Q8N2C9 162 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 ARFGAP1Q8N6T3 406 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 LENG8Q96PV6 779 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 KCTD15Q96SI1 283 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 SNRNP25Q9BV90 132 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 SLC39A8Q9C0K1 460 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 NAT10Q9H0A0 1025 aaKnown RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 HAUS4Q9H6D7 363 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 PNMA8BQ9ULN7 279 aaPredicted RBP14.35□□□□□ -0.11
TUBB6-206ENST00000587204 U3KQA8 63 aa14.35□□□□□ -0.11
TUBB6-206ENST00000587204 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 CPED1A4D0V7 1026 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 NEMP2A6NFY4 417 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 WASH4PA8MWX3 477 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 H3BM21 787 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 DAPK3O43293 454 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 AQP9O43315 295 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 OPA1O60313 960 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 TM7SF2O76062 418 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 SKILP12757 684 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 DESP17661 470 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 PAPOLAP51003 745 aaKnown RBP14.34□□□□□ -0.11
TUBB6-206ENST00000587204 YBEYP58557 167 aaPredicted RBP14.34□□□□□ -0.11
TUBB6-206ENST00000587204 E2F1Q01094 437 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 IRF4Q15306 451 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 INO80DQ53TQ3 878 aaPredicted RBP14.34□□□□□ -0.11
TUBB6-206ENST00000587204 PPP6R3Q5H9R7 873 aaPredicted RBP14.34□□□□□ -0.11
TUBB6-206ENST00000587204 ARHGAP36Q6ZRI8 547 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 NYAP1Q6ZVC0 841 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 DCBLD1Q8N8Z6 715 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 FAM174AQ8TBP5 190 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 IFI44Q8TCB0 444 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 CASKIN2Q8WXE0 1202 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 CENPTQ96BT3 561 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 ZNF653Q96CK0 615 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 IFT43Q96FT9 208 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 LRRC19Q9H756 370 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 PARVAQ9NVD7 372 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 MYO1AQ9UBC5 1043 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 NBEAQ8NFP9 2946 aa14.34□□□□□ -0.11
TUBB6-206ENST00000587204 DFFAO00273 331 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.124e-13■□□□□ 9.3
TUBB6-206ENST00000587204 BUB1BO60566 1050 aaPredicted RBP14.33□□□□□ -0.12
TUBB6-206ENST00000587204 PRAMEF11O60813 436 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 GCATO75600 419 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 FTLP02792 175 aaPredicted RBP14.33□□□□□ -0.12
TUBB6-206ENST00000587204 MIPP30301 263 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 EIF2S3P41091 472 aaKnown RBP14.33□□□□□ -0.12
TUBB6-206ENST00000587204 RGRP47804 291 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 ADKP55263 362 aaKnown RBP14.33□□□□□ -0.12
TUBB6-206ENST00000587204 PFN3P60673 137 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 FILIP1LQ4L180 1135 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 PRRT3Q5FWE3 981 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 CFAP58Q5T655 872 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 PLEKHA7Q6IQ23 1121 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 GUSBP11Q6P575 273 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 RFX8Q6ZV50 586 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 EFL1Q7Z2Z2 1120 aaKnown RBP14.33□□□□□ -0.12
TUBB6-206ENST00000587204 ZSWIM9Q86XI8 627 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 CAMK1DQ8IU85 385 aa14.33□□□□□ -0.12
TUBB6-206ENST00000587204 PHACTR4Q8IZ21 702 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms