RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ACACAQ13085 2346 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 TMEM110-MUSTN1A8MSY1 372 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 RNF103O00237 685 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 XPAP23025 273 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-209ENST00000586555 AKT2P31751 481 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 GJC1P36383 396 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 CTSKP43235 329 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 CSNK1DP48730 415 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 SUOXP51687 545 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 MESDQ14696 234 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 CFAP58Q5T655 872 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 SLCO6A1Q86UG4 719 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 LRRC49Q8IUZ0 686 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 CCDC170Q8IYT3 715 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 BBS5Q8N3I7 341 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 TC2NQ8N9U0 490 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 FAM174AQ8TBP5 190 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 RFFLQ8WZ73 363 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 TUBGCP5Q96RT8 1024 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 CALN1Q9BXU9 219 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 GDF3Q9NR23 364 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 DKK3Q9UBP4 350 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 LHX3Q9UBR4 397 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 FADS3Q9Y5Q0 445 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 PLXNA2O75051 1894 aa20.88■□□□□ 0.93
CIRBP-209ENST00000586555 A0A1W2PR77 199 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 TLR4O00206 839 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 SLC31A1O15431 190 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 CYLC1P35663 651 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-209ENST00000586555 CCT8P50990 548 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 NSUN2Q08J23 767 aaKnown RBP eCLIP20.87■□□□□ 0.93
CIRBP-209ENST00000586555 SGCGQ13326 291 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 SPA17Q15506 151 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 LAYNQ6UX15 382 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 OXR1Q8N573 874 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 PNPLA1Q8N8W4 532 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 FAM71BQ8TC56 605 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 SETD7Q8WTS6 366 aaKnown RBP20.87■□□□□ 0.93
CIRBP-209ENST00000586555 TSC1Q92574 1164 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 ZNF641Q96N77 438 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-209ENST00000586555 SEPT3Q9UH03 358 aa20.87■□□□□ 0.93
CIRBP-209ENST00000586555 TP53BP1Q12888 1972 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 SRRM3A6NNA2 597 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 YKT6O15498 198 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 FLRT2O43155 660 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 MTA2O94776 668 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 DKK1O94907 266 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 HNRNPA2B1P22626 353 aaKnown RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 MAGEA1P43355 309 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ARRB1P49407 418 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 LBRQ14739 615 aaKnown RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ZNF284Q2VY69 593 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 INAVAQ3KP66 663 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ODF2Q5BJF6 829 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 SRLQ86TD4 932 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ATPAF2Q8N5M1 289 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 PAF1Q8N7H5 531 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 NETO2Q8NC67 525 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ZCCHC14Q8WYQ9 949 aaKnown RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 KLHDC7BQ96G42 594 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 EXOC2Q96KP1 924 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ZNF670Q9BS34 389 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 SLC17A9Q9BYT1 436 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 ATP13A3Q9H7F0 1226 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 TOR4AQ9NXH8 423 aa20.86■□□□□ 0.93
CIRBP-209ENST00000586555 APOBEC2Q9Y235 224 aaKnown RBP20.86■□□□□ 0.93
CIRBP-209ENST00000586555 DOCK9Q9BZ29 2069 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 LAMA5O15230 3695 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 WNT1P04628 370 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 SERPINA4P29622 427 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 HSPA9P38646 679 aaKnown RBP20.85■□□□□ 0.93
CIRBP-209ENST00000586555 SLC1A1P43005 524 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 DPYSL3Q14195 570 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 ZNF235Q14590 738 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 TCEAL1Q15170 157 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 TSEN2Q8NCE0 465 aaKnown RBP20.85■□□□□ 0.93
CIRBP-209ENST00000586555 KLK6Q92876 244 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 PSKH2Q96QS6 385 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 PANX2Q96RD6 677 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 ELF4Q99607 663 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-209ENST00000586555 SUV39H2Q9H5I1 410 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 ERVMER34-1Q9H9K5 563 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 ETNK2Q9NVF9 386 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 BTBD3Q9Y2F9 522 aa20.85■□□□□ 0.93
CIRBP-209ENST00000586555 APC2O95996 2303 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 FREM2Q5SZK8 3169 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 ARID1BQ8NFD5 2236 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-209ENST00000586555 H0Y8X5 98 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 KCNK3O14649 394 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 WNT9AO14904 365 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 PCDHGA12O60330 932 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 IPO7O95373 1038 aaKnown RBP20.84■□□□□ 0.93
CIRBP-209ENST00000586555 PRLRP16471 622 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 IL4RP24394 825 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 NXPH1P58417 271 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 TAS2R40P59535 323 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 BCL2L1Q07817 233 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 ELP6Q0PNE2 266 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 MMRN1Q13201 1228 aa20.84■□□□□ 0.93
CIRBP-209ENST00000586555 ATP13A4Q4VNC1 1196 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms