RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 HECAQ9UBI9 543 aaPredicted RBP16.31■□□□□ 0.2
SS18-226ENST00000585241 WNT16Q9UBV4 365 aa16.31■□□□□ 0.2
SS18-226ENST00000585241 CKAP5Q14008 2032 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 GOLGA8MH3BSY2 632 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ALOX15BO15296 676 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ERLIN1O75477 346 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 NDST3O95803 873 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 PRLP01236 227 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 FAM153BP0C7A2 387 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
SS18-226ENST00000585241 HLA-DPA1P20036 260 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 CA4P22748 312 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 PRKCHP24723 683 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 RECQLP46063 649 aaPredicted RBP16.3■□□□□ 0.2
SS18-226ENST00000585241 RAD51Q06609 339 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 CDH17Q12864 832 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 OLIG2Q13516 323 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 CCINQ13939 588 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 SPARCL1Q14515 664 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 FAM153CQ494X1 144 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 FBXO43Q4G163 708 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 FNBP1LQ5T0N5 605 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 C9orf64Q5T6V5 341 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ARMC3Q5W041 872 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 SERPINA13PQ6UXR4 307 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 PDIK1LQ8N165 341 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ZNF687Q8N1G0 1237 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ZNF513Q8N8E2 541 aaPredicted RBP16.3■□□□□ 0.2
SS18-226ENST00000585241 OR52K1Q8NGK4 314 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 LRIG1Q96JA1 1093 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 PWWP2AQ96N64 755 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 FSD1LQ9BXM9 530 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 ATP13A3Q9H7F0 1226 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
SS18-226ENST00000585241 TCF20Q9UGU0 1960 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 ANTXRLA6NF34 631 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 USP12O75317 370 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 AGTP01019 485 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 FGF1P05230 155 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 RPL26P61254 145 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 BCL2L1Q07817 233 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 MSLNQ13421 630 aaPredicted RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 SLMAPQ14BN4 828 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 SLC1A5Q15758 541 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 PCSK7Q16549 785 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 HSF5Q4G112 596 aaPredicted RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 DNAJC21Q5F1R6 531 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 EMC10Q5UCC4 262 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 CENPUQ71F23 418 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 UBALD2Q8IYN6 164 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 AGGF1Q8N302 714 aaeCLIP16.29■□□□□ 0.2
SS18-226ENST00000585241 CHST14Q8NCH0 376 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 ANKRD7Q92527 254 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 ZNF641Q96N77 438 aaPredicted RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 ACOX2Q99424 681 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 GABRG3Q99928 467 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 HEPHQ9BQS7 1158 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 ARHGEF3Q9NR81 526 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 RPL26L1Q9UNX3 145 aaKnown RBP16.29■□□□□ 0.2
SS18-226ENST00000585241 PCDHGC4Q9Y5F7 938 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 STON1Q9Y6Q2 735 aa16.29■□□□□ 0.2
SS18-226ENST00000585241 ANKRD36A6QL64 1941 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 A0A1W2PQ67 120 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 TSPAN11A1L157 253 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 PGLSO95336 258 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 PIGNO95427 931 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 C7P10643 843 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 HLA-EP13747 358 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 SERPINA4P29622 427 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 NPY2RP49146 381 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 STARD6P59095 220 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 ELAVL3Q14576 367 aaKnown RBP16.28■□□□□ 0.2
SS18-226ENST00000585241 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
SS18-226ENST00000585241 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 TRMT11Q7Z4G4 463 aaKnown RBP16.28■□□□□ 0.2
SS18-226ENST00000585241 MREGQ8N565 214 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 OR6K2Q8NGY2 324 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 IFT43Q96FT9 208 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 SIGLEC10Q96LC7 697 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 APOL2Q9BQE5 337 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 OSBPL1AQ9BXW6 950 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 MTG2Q9H4K7 406 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 ARGLU1Q9NWB6 273 aaPredicted RBP16.28■□□□□ 0.2
SS18-226ENST00000585241 CACNA2D2Q9NY47 1150 aa16.28■□□□□ 0.2
SS18-226ENST00000585241 DYNC1I1O14576 645 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 SIN3BO75182 1162 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 AVILO75366 819 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 CTSLP07711 333 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 ALADP13716 330 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 NTSR1P30989 418 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 GKP32189 559 aa16.27■□□□□ 0.2
SS18-226ENST00000585241 CHRNA4P43681 627 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms