RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 BCCIPQ9P287 314 aaKnown RBP eCLIP14.13□□□□□ -0.15
UBBP4-202ENST00000584755 ZNF180Q9UJW8 692 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 SLC27A6Q9Y2P4 619 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 MYLKQ15746 1914 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 COL4A3Q01955 1670 aa14.13□□□□□ -0.15
UBBP4-202ENST00000584755 CXorf49A8MYA2 514 aaPredicted RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 PRLP01236 227 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 LAMP2P13473 410 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ALADP13716 330 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ARSAP15289 507 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 CTSOP43234 321 aaPredicted RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MSH2P43246 934 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MAGOHP61326 146 aaKnown RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 NR1H3Q13133 447 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 TMEM215Q68D42 235 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MARK2Q7KZI7 788 aaKnown RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SRLQ86TD4 932 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SLC26A11Q86WA9 606 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SLC25A41Q8N5S1 370 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 PPHLN1Q8NEY8 458 aaKnown RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 FAM76AQ8TAV0 307 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MZB1Q8WU39 189 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ELSPBP1Q96BH3 223 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ZNF669Q96BR6 464 aaPredicted RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 IFT43Q96FT9 208 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 CEP44Q9C0F1 390 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 HPS4Q9NQG7 708 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 TREX1Q9NSU2 369 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ACTL7BQ9Y614 415 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 HEATR9A2RTY3 570 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 POLR3GO15318 223 aaPredicted RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 FZD6O60353 706 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 PAPSS2O95340 614 aaPredicted RBP14.12□□□□□ -0.15
UBBP4-202ENST00000584755 NR1D1P20393 614 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 NMBRP28336 390 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MAPK8P45983 427 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ECT2LQ008S8 904 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MGAT5Q09328 741 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 POU6F1Q14863 301 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 DGKKQ5KSL6 1271 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MBLAC2Q68D91 279 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 CES3Q6UWW8 571 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 KDM7AQ6ZMT4 941 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 KDELC2Q7Z4H8 507 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 EXOC3L1Q86VI1 746 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 UNC5BQ8IZJ1 945 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SMRP1Q8NCR6 262 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 WFIKKN2Q8TEU8 576 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 PEX13Q92968 403 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 VOPP1Q96AW1 172 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 MFSD3Q96ES6 412 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 CERS2Q96G23 380 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ZFYVE19Q96K21 471 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ZNF778Q96MU6 729 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 NECTIN4Q96NY8 510 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 SLC25A13Q9UJS0 675 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 RIMKLBQ9ULI2 386 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 RAI2Q9Y5P3 530 aa14.12□□□□□ -0.15
UBBP4-202ENST00000584755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.11□□□□□ -0.15
UBBP4-202ENST00000584755 MROH6A6NGR9 719 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 OTOL1A6NHN0 477 aaPredicted RBP14.11□□□□□ -0.15
UBBP4-202ENST00000584755 TRIM24O15164 1050 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 PIAS1O75925 651 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 FAM155BO75949 473 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 GSRP00390 522 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 INHBAP08476 426 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 DGKGP49619 791 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 STK19P49842 368 aaPredicted RBP14.11□□□□□ -0.15
UBBP4-202ENST00000584755 TRAF2Q12933 501 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 TMED2Q15363 201 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 GEN1Q17RS7 908 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 ATXN7L2Q5T6C5 722 aaPredicted RBP14.11□□□□□ -0.15
UBBP4-202ENST00000584755 C22orf39Q6P5X5 142 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 NLRP9Q7RTR0 991 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 TRABD2AQ86V40 505 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 C12orf40Q86WS4 652 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 RNF135Q8IUD6 432 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 PLPP6Q8IY26 295 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 PCDH20Q8N6Y1 951 aaKnown RBP14.11□□□□□ -0.15
UBBP4-202ENST00000584755 PPM1NQ8N819 430 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 NAT16Q8N8M0 369 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 SUSD6Q92537 303 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 CDKL2Q92772 493 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 PLA2G2FQ9BZM2 168 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 TBK1Q9UHD2 729 aa14.11□□□□□ -0.15
UBBP4-202ENST00000584755 KIAA1549LQ6ZVL6 1849 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 HTRA2O43464 458 aaPredicted RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 LDB2O43679 373 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 RRP9O43818 475 aaKnown RBP14.1□□□□□ -0.15
UBBP4-202ENST00000584755 SOCS5O75159 536 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 TULP3O75386 442 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 ECI2O75521 394 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 IGSF6O95976 241 aa14.1□□□□□ -0.15
UBBP4-202ENST00000584755 ASLP04424 464 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms