RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	GNAQ	P50148	359 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	HDAC4	P56524	1084 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	CLDN2	P57739	230 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	FOXD4	Q12950	439 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	LPIN1	Q14693	890 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	MAPRE1	Q15691	268 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	TBCE	Q15813	527 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	GSTA3	Q16772	222 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	DUSP6	Q16828	381 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569		Q6ZTK2	550 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	IRF2BP2	Q7Z5L9	587 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	RBFA	Q8N0V3	343 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	GJC3	Q8NFK1	279 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	CADM4	Q8NFZ8	388 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	ETNPPL	Q8TBG4	499 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	OTULIN	Q96BN8	352 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	SIN3A	Q96ST3	1273 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	H2AFJ	Q9BTM1	129 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	RANBP17	Q9H2T7	1088 aa	Known RBP	4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	CATSPERB	Q9H7T0	1116 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	NDRG3	Q9UGV2	375 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	A4GNT	Q9UNA3	340 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	FAM96B	Q9Y3D0	163 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	SQOR	Q9Y6N5	450 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569	ITIH6	Q6UXX5	1313 aa		4.6	□□□□□ -1.67
NUP85-222	ENST00000583569		A0A087X0M5	115 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569		A0A1B0GX30	115 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	LRRC53	A6NM62	1247 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	HSPB2	A8KAH6	182 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	KLRF2	D3W0D1	207 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	MS4A18	H0YCH9	400 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	CHL1	O00533	1208 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	CBSL	P0DN79	551 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ARSB	P15848	533 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	SRD5A1	P18405	259 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	CHM	P24386	653 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	CBS	P35520	551 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	RARS	P54136	660 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	P2RX3	P56373	397 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ZP1	P60852	638 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	RPL7A	P62424	266 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	FAM27E3	Q08E93	113 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	LMOD3	Q0VAK6	560 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ITGAD	Q13349	1161 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	LAMB3	Q13751	1172 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	SIM2	Q14190	667 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ARHGEF6	Q15052	776 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	RNPS1	Q15287	305 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	TWIST1	Q15672	202 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	HSPB2	Q16082	182 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ODF3L2	Q3SX64	289 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	PRAMEF19	Q5SWL8	479 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	TXNDC8	Q6A555	127 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	LRRC8E	Q6NSJ5	796 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	CDC73	Q6P1J9	531 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	C1orf122	Q6ZSJ8	110 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	TMTC3	Q6ZXV5	915 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	C1QL2	Q7Z5L3	287 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	TDRP	Q86YL5	185 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	TEX45	Q8NA69	505 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ADAMTS15	Q8TE58	950 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	APOLD1	Q96LR9	279 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	PIP5K1A	Q99755	562 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	KRT84	Q9NSB2	600 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	ANKRD10	Q9NXR5	420 aa		4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	SRPRB	Q9Y5M8	271 aa	Known RBP	4.59	□□□□□ -1.67
NUP85-222	ENST00000583569	KDM4E	B2RXH2	506 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569		B4DGG1	531 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	EIF3CL	B5ME19	914 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	SNAP23	O00161	211 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	SEC14L2	O76054	403 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	MTA2	O94776	668 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	SEC31A	O94979	1220 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	TF	P02787	698 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	CLEC3B	P05452	202 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	GABRB2	P47870	512 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	RXRG	P48443	463 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	CXCR3	P49682	368 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	RPS3A	P61247	264 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	ESCO2	Q56NI9	601 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	OTUD1	Q5VV17	481 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	C4orf50	Q6ZRC1	276 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	MON1B	Q7L1V2	547 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	PATL1	Q86TB9	770 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	DHX40	Q8IX18	779 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	ZCCHC9	Q8N567	271 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	PARP16	Q8N5Y8	322 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	TMEM163	Q8TC26	289 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	FCRL4	Q96PJ5	515 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	MXRA8	Q9BRK3	442 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	FAM234A	Q9H0X4	552 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	RBM38	Q9H0Z9	239 aa	Known RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	BRF2	Q9HAW0	419 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	DIAPH3	Q9NSV4	1193 aa		4.58	□□□□□ -1.68
NUP85-222	ENST00000583569	SETD1B	Q9UPS6	1966 aa	Known RBP	4.58	□□□□□ -1.68

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