RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 DEPDC7Q96QD5 511 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 LGMNQ99538 433 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TKTL2Q9H0I9 626 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 WDCPQ9H6R7 721 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 USP29Q9HBJ7 922 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PIGVQ9NUD9 493 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TMEM51Q9NW97 253 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ARHGEF38Q9NXL2 777 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NLGN3Q9NZ94 848 aa9.89□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SPEGQ15772 3267 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 A6NNZ2 444 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DDX3YO15523 660 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SMAD6O43541 496 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 OPA1O60313 960 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 C1QL1O75973 258 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 F9P00740 461 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 GP1BAP07359 652 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CXCR3P49682 368 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SULT1E1P49888 294 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NEK3P51956 506 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PCBP4P57723 403 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CLDN2P57739 230 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 RNASE9P60153 205 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CXADRP78310 365 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TLE3Q04726 772 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DEUP1Q05D60 604 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CKAP4Q07065 602 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PTP4A2Q12974 167 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ARSIQ5FYB1 569 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ACBD5Q5T8D3 534 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 OTUD1Q5VV17 481 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 BROXQ5VW32 411 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CDCP2Q5VXM1 449 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SEL1L3Q68CR1 1132 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 KIAA1161Q6NSJ0 714 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 RETSATQ6NUM9 610 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 LINGO4Q6UY18 593 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 GCNT7Q6ZNI0 430 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PTAR1Q7Z6K3 402 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ABI3BPQ7Z7G0 1075 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PHF13Q86YI8 300 aaPredicted RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SPACA3Q8IXA5 215 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SYCE1Q8N0S2 351 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 LSMEM2Q8N112 164 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 MMGT1Q8N4V1 131 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZNF248Q8NDW4 579 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CPA5Q8WXQ8 436 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 HES6Q96HZ4 224 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 VCPIP1Q96JH7 1222 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PBKQ96KB5 322 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 APOLD1Q96LR9 279 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NPY6RQ99463 290 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DUSP23Q9BVJ7 150 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 HDAC8Q9BY41 377 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ABCG4Q9H172 646 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PDCL3Q9H2J4 239 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 IL36AQ9UHA7 158 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 AMFRQ9UKV5 643 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZFR2Q9UPR6 939 aaKnown RBP9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PCDHB1Q9Y5F3 818 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 HS3ST3A1Q9Y663 406 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ALG6Q9Y672 507 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ASXL3Q9C0F0 2248 aa9.88□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZZEF1O43149 2961 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 A0A0D9SEW6 157 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DRGXA6NNA5 263 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 H3BM21 787 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SCAMP1O15126 338 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CSO75390 466 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 LEFTY1O75610 366 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 MPOP05164 745 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 GIMD1P0DJR0 217 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 OR1E1P30953 314 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CXCR5P32302 372 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 CDH5P33151 784 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 UCNP55089 124 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 HNRNPKP61978 463 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NOMO3P69849 1222 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 GABREP78334 506 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZNF542PQ5EBM4 170 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NAA35Q5VZE5 725 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 KYAT3Q6YP21 454 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZNF783Q6ZMS7 281 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 DPY19L3Q6ZPD9 716 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 Q6ZSR6 202 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PEX26Q7Z412 305 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TFAP2DQ7Z6R9 452 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 ZNF683Q8IZ20 524 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 SLC22A18ASQ8N1D0 253 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 FAM181AQ8N9Y4 354 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 NOA1Q8NC60 698 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 TMEM35BQ8NCS4 154 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 OR7D4Q8NG98 312 aa9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 PGAP3Q96FM1 320 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-227ENST00000583352 MS4A14Q96JA4 679 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms